RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 PTGFRNQ9P2B2 879 aa13.08□□□□□ -0.31
PRAME-205ENST00000405655 TMCC3Q9ULS5 477 aa13.08□□□□□ -0.31
PRAME-205ENST00000405655 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.31
PRAME-205ENST00000405655 SPACA6W5XKT8 324 aa13.08□□□□□ -0.31
PRAME-205ENST00000405655 TTC28Q96AY4 2481 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 ADAMTS20P59510 1910 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 A0A087WUU8 490 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 SYNDIG1LA6NDD5 238 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 H3BMH7 237 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 H3BN98 237 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 OR2B3O76000 313 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 LCKP06239 509 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 TGFBR1P36897 503 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 TAS2R41P59536 307 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 SLC35A2P78381 396 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 IL18R1Q13478 541 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 DGCR6Q14129 220 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 FAM53BQ14153 422 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 INAVAQ3KP66 663 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 ARHGAP11BQ3KRB8 267 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 WDR45BQ5MNZ6 344 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 ENTPD8Q5MY95 495 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 PERM1Q5SV97 790 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 LYSMD4Q5XG99 296 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 GTF2IRD2BQ6EKJ0 949 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 GUSBP11Q6P575 273 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 ZNF574Q6ZN55 896 aaPredicted RBP13.08□□□□□ -0.32
PRAME-205ENST00000405655 GTF2IRD2Q86UP8 949 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 P3H2Q8IVL5 708 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 VWA5B2Q8N398 1253 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 FAR1Q8WVX9 515 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 RIT1Q92963 219 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 DHRS1Q96LJ7 313 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.08□□□□□ -0.32
PRAME-205ENST00000405655 PRTFDC1Q9NRG1 225 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 ERVK-19Q9WJR5 959 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 SLC9A8Q9Y2E8 581 aa13.08□□□□□ -0.32
PRAME-205ENST00000405655 PLOD3O60568 738 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 CPNE6O95741 557 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 ALOX5P09917 674 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 RNH1P13489 461 aaKnown RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 RXRGP48443 463 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 EMDP50402 254 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 CRISP1P54107 249 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 HPCAP84074 193 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 PSG6Q00889 435 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 VWA2Q5GFL6 755 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 NPSR1Q6W5P4 371 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 LAPTM4BQ86VI4 370 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 SDR16C5Q8N3Y7 309 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 RNF217Q8TC41 542 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 TMEM255BQ8WV15 326 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 FAM46AQ96IP4 442 aaKnown RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 ELF4Q99607 663 aaPredicted RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 ARHGDIGQ99819 225 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 YTHDF1Q9BYJ9 559 aaKnown RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 UCK2Q9BZX2 261 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 PCED1AQ9H1Q7 454 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 PIGUQ9H490 435 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 SYNDIG1Q9H7V2 258 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 MPDZO75970 2070 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 A0A1W2PPW3 197 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 H3BMQ9 156 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 ASNA1O43681 348 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 IFNA16P05015 189 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 SLC35E2P0CK97 266 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 GABRB1P18505 474 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 HTR2AP28223 471 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 LSM3P62310 102 aaKnown RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 ESRRGP62508 458 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 B3GNT6Q6ZMB0 384 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 UBALD2Q8IYN6 164 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 OR13F1Q8NGS4 319 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 RHOXF1Q8NHV9 184 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 GGHQ92820 318 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 COG8Q96MW5 612 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 MCHR1Q99705 422 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 BTBD2Q9BX70 525 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 POLR2J3Q9H1A7 115 aaKnown RBP13.07□□□□□ -0.32
PRAME-205ENST00000405655 DUSP21Q9H596 190 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 FLRT3Q9NZU0 649 aa13.07□□□□□ -0.32
PRAME-205ENST00000405655 C17orf51A8MQB3 221 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 CYP7B1O75881 506 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 KCNK2O95069 426 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 CFIP05156 583 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 STSP08842 583 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 GPR4P46093 362 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 ANXA11P50995 505 aaKnown RBP13.06□□□□□ -0.32
PRAME-205ENST00000405655 ZNF136P52737 540 aa13.06□□□□□ -0.32
PRAME-205ENST00000405655 EXOSC6Q5RKV6 272 aaKnown RBP13.06□□□□□ -0.32
PRAME-205ENST00000405655 MRPL2Q5T653 305 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms