RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 SLC9B1Q4ZJI4 515 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 PRAMEF20Q5VT98 475 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 SLC22A10Q63ZE4 541 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 LYPD8Q6UX82 237 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 MAVSQ7Z434 540 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 C9orf40Q8IXQ3 194 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 TNIP2Q8NFZ5 429 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 NEIL3Q8TAT5 605 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 SLC22A8Q8TCC7 542 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 PPCDCQ96CD2 204 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 SMR3AQ99954 134 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 NSRP1Q9H0G5 558 aaKnown RBP16.4■□□□□ 0.22
HDAC11-204ENST00000404040 NPHS2Q9NP85 383 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 MRGBPQ9NV56 204 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 FGFR1OP2Q9NVK5 253 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 QPCTLQ9NXS2 382 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 HEY2Q9UBP5 337 aa16.4■□□□□ 0.22
HDAC11-204ENST00000404040 FOXD3Q9UJU5 478 aaPredicted RBP16.4■□□□□ 0.22
HDAC11-204ENST00000404040 UBDO15205 165 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 SLITRK5O94991 958 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 IGKV3-11P04433 115 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 CPMP14384 443 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 NTSP30990 170 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 CEACAM8P31997 349 aaPredicted RBP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 MPIP34949 423 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 CLNS1AP54105 237 aaKnown RBP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 WNT3P56703 355 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 KEAP1Q14145 624 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 LSM12Q3MHD2 195 aaKnown RBP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 POMZP3Q6PJE2 187 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 OR4N5Q8IXE1 308 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 C18orf12Q96KH6 178 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 EGLN2Q96KS0 407 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 ZNF317Q96PQ6 595 aaPredicted RBP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 DPY30Q9C005 99 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 PROK2Q9HC23 129 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 AIG1Q9NVV5 245 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 FAM53CQ9NYF3 392 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 TRIM33Q9UPN9 1127 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 CHCHD2Q9Y6H1 151 aaPredicted RBP16.39■□□□□ 0.21
HDAC11-204ENST00000404040 ZANQ9Y493 2812 aa16.39■□□□□ 0.21
HDAC11-204ENST00000404040 KDM4EB2RXH2 506 aaPredicted RBP16.38■□□□□ 0.21
HDAC11-204ENST00000404040 SCAMP2O15127 329 aaKnown RBP16.38■□□□□ 0.21
HDAC11-204ENST00000404040 EPPINO95925 133 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 ATP1B1P05026 303 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 TRPC1P48995 793 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 STX1BP61266 288 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 PDE7AQ13946 482 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 PTGR1Q14914 329 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 SPRED3Q2MJR0 410 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 DPY19L1Q2PZI1 675 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 FBXW10Q5XX13 1052 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 Q71RC1 249 aaPredicted RBP16.38■□□□□ 0.21
HDAC11-204ENST00000404040 LACC1Q8IV20 430 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 DND1Q8IYX4 353 aaKnown RBP16.38■□□□□ 0.21
HDAC11-204ENST00000404040 SLC15A4Q8N697 577 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 OR10G3Q8NGC4 313 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 ZFP28Q8NHY6 868 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 RIT1Q92963 219 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 SENP5Q96HI0 755 aaPredicted RBP16.38■□□□□ 0.21
HDAC11-204ENST00000404040 BBS4Q96RK4 519 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 CNIH4Q9P003 139 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 ZNF629Q9UEG4 869 aaPredicted RBP16.38■□□□□ 0.21
HDAC11-204ENST00000404040 ATP6V1HQ9UI12 483 aa16.38■□□□□ 0.21
HDAC11-204ENST00000404040 C15orf38-AP3S2A0A0A6YYH1 394 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 TUBAL3A6NHL2 446 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 AHRRA9YTQ3 701 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 AKAP10O43572 662 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 LRATO95237 230 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 HOXC12P31275 282 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 LSP1P33241 339 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 TIMP3P35625 211 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 ZNF136P52737 540 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 DIO3P55073 304 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 CRYZQ08257 329 aaKnown RBP16.37■□□□□ 0.21
HDAC11-204ENST00000404040 PDCD4Q53EL6 469 aaKnown RBP16.37■□□□□ 0.21
HDAC11-204ENST00000404040 CPTPQ5TA50 214 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 METTL21CQ5VZV1 264 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 KRTAP1-3Q8IUG1 177 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 GALNT12Q8IXK2 581 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 GLB1L3Q8NCI6 653 aaPredicted RBP16.37■□□□□ 0.21
HDAC11-204ENST00000404040 FAM13CQ8NE31 585 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 CLHC1Q8NHS4 586 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
HDAC11-204ENST00000404040 ERP27Q96DN0 273 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 ZBED6CLQ96FA7 236 aaPredicted RBP16.37■□□□□ 0.21
HDAC11-204ENST00000404040 RILPQ96NA2 401 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 OR52B2Q96RD2 323 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 ZBTB18Q99592 522 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 BRINP2Q9C0B6 783 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 PLEKHF2Q9H8W4 249 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 SH3BP4Q9P0V3 963 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 KLHL14Q9P2G3 628 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 DCTN4Q9UJW0 460 aa16.37■□□□□ 0.21
HDAC11-204ENST00000404040 CNOT11Q9UKZ1 510 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms