RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SERPINB5P36952 375 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 ASMTP46597 345 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 RFX3P48380 749 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 SZRD1Q7Z422 152 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 IFNEQ86WN2 208 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 MREGQ8N565 214 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 NAXEQ8NCW5 288 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 OR4K17Q8NGC6 315 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 ZNF764Q96H86 408 aaPredicted RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 PPP3R2Q96LZ3 170 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 LMF2Q9BU23 707 aaKnown RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 C3orf14Q9HBI5 128 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 MCCC2Q9HCC0 563 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 SDHAF3Q9NRP4 125 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 PPP4R1LQ9P1A2 415 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 GIMAP2Q9UG22 337 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 ZDHHC2Q9UIJ5 367 aa12.1□□□□□ -0.47
SDF4-203ENST00000403997 RPH3AQ9Y2J0 694 aaPredicted RBP12.1□□□□□ -0.47
SDF4-203ENST00000403997 FBN2P35556 2912 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ARHGAP21Q5T5U3 1957 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 CD8B2A6NJW9 211 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 TTC36A6NLP5 189 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 H0Y3Z8 333 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 DVL2O14641 736 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 TYROBPO43914 113 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 FADS1O60427 444 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ZIC3O60481 467 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 SKAP2O75563 359 aaPredicted RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 IL33O95760 270 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 IFI6P09912 130 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 DDX5P17844 614 aaKnown RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 DPP4P27487 766 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 MAPK1P28482 360 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ARRB2P32121 409 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 STARP49675 285 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 CLK3P49761 638 aaKnown RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 GAS1P54826 345 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 PSMD4P55036 377 aaKnown RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 DLX5P56178 289 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ZNF844Q08AG5 666 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 MYBPHQ13203 477 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 PDE7AQ13946 482 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ATP6AP1LQ52LC2 224 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 AAGABQ6PD74 315 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 NUP43Q8NFH3 380 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ZPLD1Q8TCW7 415 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 GPR151Q8TDV0 419 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 RNF138Q8WVD3 245 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 C3orf30Q96M34 536 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 SFXN2Q96NB2 322 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 TUBA1CQ9BQE3 449 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ZNF559Q9BR84 538 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 DSN1Q9H410 356 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 ACSS1Q9NUB1 689 aaPredicted RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 FLRT3Q9NZU0 649 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 MRPS18CQ9Y3D5 142 aaKnown RBP12.09□□□□□ -0.47
SDF4-203ENST00000403997 LRBAP50851 2863 aa12.09□□□□□ -0.47
SDF4-203ENST00000403997 GXYLT2A0PJZ3 443 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 WDR91A4D1P6 747 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 KCNH1O95259 989 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 UTS2O95399 124 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 CAPN3P20807 821 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 UQCRC1P31930 480 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 HPCAL1P37235 193 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 ETV4P43268 484 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 AGFG1P52594 562 aaKnown RBP12.08□□□□□ -0.48
SDF4-203ENST00000403997 GFRA1P56159 465 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 DSCR4P56555 118 aaPredicted RBP12.08□□□□□ -0.48
SDF4-203ENST00000403997 STX5Q13190 355 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 VPS26BQ4G0F5 336 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 XKR7Q5GH72 579 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 CES4AQ5XG92 561 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 ARSKQ6UWY0 536 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 MARCH3Q86UD3 253 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 RELL2Q8NC24 303 aaPredicted RBP12.08□□□□□ -0.48
SDF4-203ENST00000403997 OR2M3Q8NG83 312 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 OR7A2PQ8NGA2 310 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 DUSP19Q8WTR2 217 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 PIK3R3Q92569 461 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 SLC9A6Q92581 669 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 ZBTB9Q96C00 473 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 MTERF3Q96E29 417 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 LRRC46Q96FV0 321 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 RMND5BQ96G75 393 aaPredicted RBP12.08□□□□□ -0.48
SDF4-203ENST00000403997 PKNOX2Q96KN3 472 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 CENPHQ9H3R5 247 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 MED11Q9P086 117 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 ZNF629Q9UEG4 869 aaPredicted RBP12.08□□□□□ -0.48
SDF4-203ENST00000403997 KCNN3Q9UGI6 736 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms