RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PRSS53Q2L4Q9 553 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZNF672Q499Z4 452 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 IL17RELQ6ZVW7 336 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 COMMD6Q7Z4G1 85 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZNF619Q8N2I2 560 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 METTL4Q8N3J2 472 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR6K3Q8NGY3 331 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KCTD4Q8WVF5 259 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FBXW5Q969U6 566 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TRMT61AQ96FX7 289 aaKnown RBP10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 HBEGFQ99075 208 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NTMT1Q9BV86 223 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 IPPKQ9H8X2 491 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FOLH1BQ9HBA9 442 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SAYSD1Q9NPB0 183 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FARSBQ9NSD9 589 aaKnown RBP10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CDC42EP3Q9UKI2 254 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 JRKLQ9Y4A0 524 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 RNF115Q9Y4L5 304 aa10.61□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FAM159BA6NKW6 160 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 RAMP1O60894 148 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CSNK2A2P19784 350 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PSMB1P20618 241 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 EVI2BP34910 448 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 STX5Q13190 355 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GTF2H2Q13888 395 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FGFBP1Q14512 234 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TAB1Q15750 504 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CCNYL2Q5T2Q4 361 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GTF2H2CQ6P1K8 395 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 APOOLQ6UXV4 268 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZBED8Q8IZ13 594 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GTPBP3Q969Y2 492 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KLHL29Q96CT2 875 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 C1GALT1C1Q96EU7 318 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 C11orf24Q96F05 449 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NSUN5Q96P11 429 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GPR78Q96P69 363 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SERPINI1Q99574 410 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TRIM31Q9BZY9 425 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TRIM2Q9C040 744 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NSMCE4AQ9NXX6 385 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PRODH2Q9UF12 536 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ADAM29Q9UKF5 820 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PPP2R2CQ9Y2T4 447 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ACOT9Q9Y305 439 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TCRBV9S1A1TA0A576 114 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 HMX2A2RU54 273 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 FAM234BA2RU67 622 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SLC35F4A4IF30 521 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PPP6CO00743 305 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SSX4O60224 188 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 UGDHO60701 494 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 LTA4HP09960 611 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GP5P40197 560 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MAPK12P53778 367 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PNLIPRP2P54317 469 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 EEFSECP57772 596 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 IRX1P78414 480 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MRPS25P82663 173 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TRAF3Q13114 568 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 EFR3AQ14156 821 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SLMAPQ14BN4 828 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 LGSNQ5TDP6 509 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 C6orf163Q5TEZ5 329 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 DNAJC14Q6Y2X3 702 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 RPS27LQ71UM5 84 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 MARCH3Q86UD3 253 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 DTX2Q86UW9 622 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SLC44A2Q8IWA5 706 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GABRG1Q8N1C3 465 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 SLC35F6Q8N357 371 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GBP7Q8N8V2 638 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR7G2Q8NG99 324 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR9A2Q8NGT5 310 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 ZNF675Q8TD23 568 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 DUSP19Q8WTR2 217 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 HTRA1Q92743 480 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GMPPAQ96IJ6 420 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TNFRSF13CQ96RJ3 184 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 KCNK17Q96T54 332 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 CPNE1Q99829 537 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 OR10A4Q9H209 315 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 C12orf49Q9H741 205 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NOL11Q9H8H0 719 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 NMRAL1Q9HBL8 299 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 TMEM160Q9NX00 188 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PPP4R1LQ9P1A2 415 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 B3GALT5Q9Y2C3 310 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 GPR52Q9Y2T5 361 aa10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 PRKDCP78527 4128 aaKnown RBP10.59□□□□□ -0.71
SPTLC1P3-201ENST00000403408 C1orf226A1L170 272 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 SHISA9B4DS77 424 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 EIF1AYO14602 144 aaKnown RBP10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 KCNAB3O43448 404 aa10.58□□□□□ -0.72
SPTLC1P3-201ENST00000403408 CXCL13O43927 109 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms