RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 POLE3Q9NRF9 147 aa12.19□□□□□ -0.46
PRAME-203ENST00000402697 MOSPD1Q9UJG1 213 aa12.19□□□□□ -0.46
PRAME-203ENST00000402697 EXOGQ9Y2C4 368 aaKnown RBP12.19□□□□□ -0.46
PRAME-203ENST00000402697 SPACA6W5XKT8 324 aa12.19□□□□□ -0.46
PRAME-203ENST00000402697 A0A087WV62 115 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3DA0A087WVF3 549 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3IA0A087WXS9 549 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3EA0A087X179 549 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TRDV1A0A1B0GX56 115 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 FAM221BA6H8Z2 402 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3LB9A6J9 549 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 K7EQS6 105 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 B3GALT2O43825 422 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 KCNK2O95069 426 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 GUSBP08236 651 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3HP0C7X1 549 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 CPN2P22792 545 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 LTBRP36941 435 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ETV5P41161 510 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ETV1P50549 477 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SCN1BQ07699 218 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 DDI2Q5TDH0 399 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 AADACL4Q5VUY2 407 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 LIPKQ5VXJ0 399 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 NXNL2Q5VZ03 156 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3CQ6IPX1 549 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ZNF544Q6NX49 715 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 QSOX2Q6ZRP7 698 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 GDPD3Q7L5L3 318 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 PRICKLE2Q7Z3G6 844 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 VN1R4Q7Z5H5 301 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 RANBP3LQ86VV4 465 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 GID4Q8IVV7 300 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TDHQ8IZJ6 230 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 TBC1D3Q8IZP1 549 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 SLC43A2Q8N370 569 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 CLIP4Q8N3C7 705 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 OR9A2Q8NGT5 310 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 MCHR1Q99705 422 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 GPA33Q99795 319 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 YIPF4Q9BSR8 244 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 BARHL1Q9BZE3 327 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SRMSQ9H3Y6 488 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 FN3KQ9H479 309 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 CDH10Q9Y6N8 788 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 RGS5O15539 181 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 AKAP8O43823 692 aaKnown RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 HTR1FP30939 366 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 RAB8AP61006 207 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 DUSP2Q05923 314 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 FOXD4Q12950 439 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 SELENBP1Q13228 472 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 DESI1Q6ICB0 168 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ABHD13Q7L211 337 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ZNF655Q8N720 491 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 ASB15Q8WXK1 588 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SLC35A4Q96G79 324 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SLC41A3Q96GZ6 507 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 WDR92Q96MX6 357 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 STACQ99469 402 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 PIGUQ9H490 435 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 FGF22Q9HCT0 170 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SNTG1Q9NSN8 517 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 SEMA4GQ9NTN9 838 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ASB6Q9NWX5 421 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 KCMF1Q9P0J7 381 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 POLHQ9Y253 713 aa12.18□□□□□ -0.46
PRAME-203ENST00000402697 ZNF443Q9Y2A4 671 aaPredicted RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
PRAME-203ENST00000402697 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 SURF4O15260 269 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 PRKRAO75569 313 aaKnown RBP12.17□□□□□ -0.46
PRAME-203ENST00000402697 IGHA1P01876 353 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 HLA-DPB1P04440 258 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 DBIP07108 87 aaKnown RBP12.17□□□□□ -0.46
PRAME-203ENST00000402697 CD53P19397 219 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 RPS5P46782 204 aaKnown RBP12.17□□□□□ -0.46
PRAME-203ENST00000402697 CDH11P55287 796 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 SEC13P55735 322 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 TPTEP56180 551 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 PGGHGQ32M88 737 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
PRAME-203ENST00000402697 EXOSC6Q5RKV6 272 aaKnown RBP12.17□□□□□ -0.46
PRAME-203ENST00000402697 AGAP6Q5VW22 663 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 FRRS1Q6ZNA5 592 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 ZNF620Q6ZNG0 422 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 KLHL36Q8N4N3 616 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 OR2T33Q8NG76 320 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 BRIX1Q8TDN6 353 aaKnown RBP12.17□□□□□ -0.46
PRAME-203ENST00000402697 KLK6Q92876 244 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 AGAP4Q96P64 663 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 SRRQ9GZT4 340 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 ANKRA2Q9H9E1 313 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 DUSP22Q9NRW4 184 aa12.17□□□□□ -0.46
PRAME-203ENST00000402697 INIPQ9NRY2 104 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms