RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 FCMRO60667 390 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 OR5F1O95221 314 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 SOD1P00441 154 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 GKN3PP0CG01 181 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 NPIPA8P0DM63 369 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 SAGP10523 405 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 HOXB3P14651 431 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 HLA-DMAP28067 261 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PCDH1Q08174 1060 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 TGM3Q08188 693 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 RAB40BQ12829 278 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 GPNMBQ14956 572 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 TEAD2Q15562 447 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 OCLNQ16625 522 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 LAMTOR1Q6IAA8 161 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PARS2Q7L3T8 475 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 TBC1D19Q8N5T2 526 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PIGXQ8TBF5 258 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 TMEM255BQ8WV15 326 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ZNF689Q96CS4 500 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 KLHL31Q9H511 634 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 KLHL21Q9UJP4 597 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PCYT1BQ9Y5K3 369 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 BACE2Q9Y5Z0 518 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 LEUTXA8MZ59 168 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PRR23D1E9PI22 279 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 LCMT2O60294 686 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 RFPL3O75679 317 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 OR7A10O76100 309 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PCDH8O95206 1070 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 SRPRAP08240 638 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 PRR23D2P0DMB1 279 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 PRG2P13727 222 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ZNF30P17039 623 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 CRYZQ08257 329 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 IRF5Q13568 498 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 DSG2Q14126 1118 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ESCO2Q56NI9 601 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 NUDT13Q86X67 352 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 MCHR1Q99705 422 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 CACNG6Q9BXT2 260 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 DPH1Q9BZG8 443 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PPP1R3EQ9H7J1 279 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 NEUROD4Q9HD90 331 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 NANSQ9NR45 359 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 RDH8Q9NYR8 311 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 GLTPQ9NZD2 209 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 OR6C2Q9NZP2 312 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 EXOSC1Q9Y3B2 195 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 PLXNA4Q9HCM2 1894 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 NPIPB8E9PQR5 432 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 FOXE1O00358 373 aaPredicted RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 QSOX1O00391 747 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 SMAD9O15198 467 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 UBXN7O94888 489 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 PYCR1P32322 319 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ACSL1P33121 698 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 PTGS2P35354 604 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 IFNGR2P38484 337 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 MC3RP41968 323 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 LTB4RQ15722 352 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 FNDC3BQ53EP0 1204 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 FAM46CQ5VWP2 391 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 TPGS2Q68CL5 300 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 C18orf63Q68DL7 685 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 CDC73Q6P1J9 531 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 HTR3DQ70Z44 454 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 COMMD7Q86VX2 200 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 TCTE3Q8IZS6 198 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 TRMT10AQ8TBZ6 339 aaKnown RBP8.61□□□□□ -1.03
HPS4-203ENST00000402105 RIT1Q92963 219 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 IRF7Q92985 503 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 RFKQ969G6 155 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 RBCK1Q9BYM8 510 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 RNF32Q9H0A6 362 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ZSCAN32Q9NX65 697 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 KCND3Q9UK17 655 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 ENTPD4Q9Y227 616 aa8.61□□□□□ -1.03
HPS4-203ENST00000402105 DSPPQ9NZW4 1301 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 CHURC1-FNTBB4DL54 471 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 NDUFS4O43181 175 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 PDGFAP04085 211 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 PROS1P07225 676 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 CLTBP09497 229 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 TRAPPC2P0DI81 140 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 TRAPPC2BP0DI82 140 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 CLUP10909 449 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 ACADMP11310 421 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 SYN1P17600 705 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 TBXA2RP21731 343 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 ENPP1P22413 925 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 TRHRP34981 398 aaPredicted RBP8.6□□□□□ -1.03
HPS4-203ENST00000402105 CCR2P41597 374 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 CLDN20P56880 219 aa8.6□□□□□ -1.03
HPS4-203ENST00000402105 TEKQ02763 1124 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms