RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 C16orf52Q8NHV5 167 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 FUZQ9BT04 418 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 SLC7A5P2Q9GIP4 190 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 PNO1Q9NRX1 252 aaKnown RBP23.8■■□□□ 1.4
CPNE1-205ENST00000401607 CTSFQ9UBX1 484 aa23.8■■□□□ 1.4
CPNE1-205ENST00000401607 NPIPA5A0A0B4J1W7 369 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 ARRDC5A6NEK1 342 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 CLDN24A6NM45 220 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 NPIPA7E9PJI5 369 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 THBS1P07996 1170 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 NPIPA8P0DM63 369 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 CYP4B1P13584 511 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 CDH2P19022 906 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 CLK3P49761 638 aaKnown RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 EEF1A1P68104 462 aaKnown RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF770Q6IQ21 691 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 TTC33Q6PID6 262 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 B3GNT8Q7Z7M8 397 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 C8orf59Q8N0T1 100 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 OR4N2Q8NGD1 307 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 ATOH1Q92858 354 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-205ENST00000401607 PRRC1Q96M27 445 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 NIPSNAP1Q9BPW8 284 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 POLE3Q9NRF9 147 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 OCIAD1Q9NX40 245 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 SLC13A4Q9UKG4 626 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 HCN4Q9Y3Q4 1203 aa23.79■■□□□ 1.4
CPNE1-205ENST00000401607 TCRBV16S1A1N1A0A5B0 115 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 E9PQ18 207 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 BCKDKO14874 412 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 TPST2O60704 377 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 SCRG1O75711 98 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 LDOC1O95751 146 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 IL7RP16871 459 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 CBLP22681 906 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 APOFQ13790 326 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 LARS2Q15031 903 aaKnown RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 SEC23BQ15437 767 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 FGD3Q5JSP0 725 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF691Q5VV52 312 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 THAP5Q7Z6K1 395 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 GABARAPL3Q9BY60 117 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 APMAPQ9HDC9 416 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 PCDHGA8Q9Y5G5 932 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 DMDP11532 3685 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 PEX12O00623 359 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 IGKV1D-16P01601 117 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 DBIP07108 87 aaKnown RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 CT45A8P0DMV1 189 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 CT45A9P0DMV2 189 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 EPHA2P29317 976 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 TRHRP34981 398 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 CT45A2Q5DJT8 189 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 LAPTM4BQ86VI4 370 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 TMEM151BQ8IW70 566 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 PRSS58Q8IYP2 241 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 OR7G1Q8NGA0 311 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 SENP5Q96HI0 755 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 PRR14Q9BWN1 585 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 ITPAQ9BY32 194 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 VN1R1Q9GZP7 353 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 CACYBPQ9HB71 228 aaKnown RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 PAPOLBQ9NRJ5 636 aaKnown RBP23.78■■□□□ 1.4
CPNE1-205ENST00000401607 MAN2C1Q9NTJ4 1040 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 KLHL28Q9NXS3 571 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF232Q9UNY5 417 aa23.78■■□□□ 1.4
CPNE1-205ENST00000401607 FAM86C2PA6NEL3 165 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 A8MUA0 341 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 UGT2B11O75310 529 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 UGT2B17O75795 530 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 RORAP35398 523 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 IL18R1Q13478 541 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 ZNF321PQ8N8H1 164 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 FTSJ1Q9UET6 329 aa23.77■■□□□ 1.4
CPNE1-205ENST00000401607 A0A1W2PRQ8 180 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 GUSBP08236 651 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 ACP1P24666 158 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 SMIM11AP58511 58 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 ZFP36L1Q07352 338 aaKnown RBP23.76■■□□□ 1.39
CPNE1-205ENST00000401607 NPRL3Q12980 569 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 RAPSNQ13702 412 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 DGCR6Q14129 220 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 KEAP1Q14145 624 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 KCTD21Q4G0X4 260 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 DCST1Q5T197 706 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 AQP11Q8NBQ7 271 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 SLC7A13Q8TCU3 470 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 PMM1Q92871 262 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 FNDC11Q9BVV2 318 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 TGIF2Q9GZN2 237 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 CTPS2Q9NRF8 586 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 TMCC3Q9ULS5 477 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 POFUT2Q9Y2G5 429 aa23.76■■□□□ 1.39
CPNE1-205ENST00000401607 IGLV3-12A0A075B6K2 115 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 TRIM64A6NGJ6 449 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 GALR2O43603 387 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 ELK4P28324 431 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 RGS8P57771 180 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-205ENST00000401607 ISL1P61371 349 aa23.75■■□□□ 1.39
CPNE1-205ENST00000401607 TRA2AQ13595 282 aaKnown RBP eCLIP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms