RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 RNF32Q9H0A6 362 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 BMP4P12644 408 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 CDKN2CP42773 168 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 FXNQ16595 210 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZNF423Q2M1K9 1284 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 RRNAD1Q96FB5 475 aaKnown RBP13.03□□□□□ -0.32
VAPA-202ENST00000400000 SERINC2Q96SA4 455 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 OBP2BQ9NPH6 170 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 TRAV27A0A087WT01 109 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 TAP2Q03519 686 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 CLCA4Q14CN2 919 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 PRAMEF20Q5VT98 475 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 LRRTM3Q86VH5 581 aa13.03□□□□□ -0.32
VAPA-202ENST00000400000 NOTOA8MTQ0 251 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 CBX7O95931 251 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 HNRNPA2B1P22626 353 aaKnown RBP13.02□□□□□ -0.32
VAPA-202ENST00000400000 CXCL12P48061 93 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 PIN1Q13526 163 aaPredicted RBP13.02□□□□□ -0.32
VAPA-202ENST00000400000 GRHL2Q6ISB3 625 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 STK35Q8TDR2 534 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 RAB7BQ96AH8 199 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 MOAP1Q96BY2 351 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 ZNF681Q96N22 645 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 RTP3Q9BQQ7 232 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 GON4LQ3T8J9 2241 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 PTPN6P29350 595 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 POLR2HP52434 150 aaKnown RBP13.02□□□□□ -0.32
VAPA-202ENST00000400000 SEC61A1P61619 476 aaKnown RBP13.02□□□□□ -0.32
VAPA-202ENST00000400000 TUBB3Q13509 450 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 PLCXD3Q63HM9 321 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 LCN10Q6JVE6 187 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 C1orf74Q96LT6 269 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 PLEKHJ1Q9NW61 149 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 LRRC42Q9Y546 428 aa13.02□□□□□ -0.32
VAPA-202ENST00000400000 TRAV18A0A075B6X5 111 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 RFPL1O75677 317 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ARAFP10398 606 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 HTR6P50406 440 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ERVPABLB-1P60509 514 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ZNF789Q5FWF6 425 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 BPHLQ86WA6 291 aaPredicted RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 OR52R1Q8NGF1 315 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ISOC1Q96CN7 298 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 KDM4EB2RXH2 506 aaPredicted RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 ALDOAP04075 364 aaKnown RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■□□□ 11.6
VAPA-202ENST00000400000 S100PP25815 95 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 CAV2P51636 162 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 COMMD6Q7Z4G1 85 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 PIGCQ92535 297 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ARL6Q9H0F7 186 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 DYNLRB1Q9NP97 96 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 TRIM64CA6NLI5 447 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 SERPINA2P20848 420 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 CAMLGP49069 296 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 SH3BP2P78314 561 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 EIF5AL1Q6IS14 154 aaKnown RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ADAMTS6Q9UKP5 1117 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 BORCS7-ASMTA0A0B4J1R7 106 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 SLC19A2O60779 497 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ZIC2O95409 532 aaPredicted RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 WNT7BP56706 349 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 ERVK-25P63136 954 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 SLC35F2Q8IXU6 374 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 HLA-CQ95604 372 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 SPO11Q9Y5K1 396 aa13.02□□□□□ -0.33
VAPA-202ENST00000400000 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
VAPA-202ENST00000400000 OR6C6A6NF89 314 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 SDHDO14521 159 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 SLC35E2BP0CK96 405 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 SIRPAP78324 504 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 ADOQ96SZ5 270 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 PAK1IP1Q9NWT1 392 aaPredicted RBP13.01□□□□□ -0.33
VAPA-202ENST00000400000 EBF1Q9UH73 591 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 IFT172Q9UG01 1749 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 ANKRD26Q9UPS8 1709 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 BCAS2O75934 225 aaPredicted RBP13.01□□□□□ -0.33
VAPA-202ENST00000400000 ZNF695Q8IW36 515 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 IL17RDQ8NFM7 739 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 OR56B2PQ8NGI1 322 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 SLC2A12Q8TD20 617 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 FRZBQ92765 325 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 PLEK2Q9NYT0 353 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 IER3IP1Q9Y5U9 82 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 SULT2B1O00204 365 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 MT-ND2P03891 347 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 DCNP07585 359 aaKnown RBP13.01□□□□□ -0.33
VAPA-202ENST00000400000 MPC1LP0DKB6 136 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 CSNK1EP49674 416 aaKnown RBP13.01□□□□□ -0.33
VAPA-202ENST00000400000 EMP2P54851 167 aa13.01□□□□□ -0.33
VAPA-202ENST00000400000 OR52E8Q6IFG1 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms