RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 LILRA3Q8N6C8 439 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZFP41Q8N8Y5 198 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 MFSD9Q8NBP5 474 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR2L3Q8NG85 312 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CPNE2Q96FN4 548 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ASB16Q96NS5 453 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 DPH1Q9BZG8 443 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 FMO6PO60774 539 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CRHBPP24387 322 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 EIF2DP41214 584 aaKnown RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 WNT4P56705 351 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CHAF1BQ13112 559 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF791Q3KP31 576 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ACOT12Q8WYK0 555 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 RFT1Q96AA3 541 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 TREX2Q9BQ50 279 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 C1QTNF3Q9BXJ4 246 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF639Q9UID6 485 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 SMCHD1A6NHR9 2005 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 HCKP08631 526 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CD38P28907 300 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 CD6P30203 668 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC37A3Q8NCC5 494 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZFP90Q8TF47 636 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 PKMYT1Q99640 499 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 TBC1D24Q9ULP9 559 aa13.41□□□□□ -0.26
PCDHGA11-201ENST00000398587 INMT-MINDY4F8WBC2 141 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 LDB3O75112 727 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 ITGA5P08648 1049 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 H2BFMP0C1H6 154 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 TFPTP0C1Z6 253 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 NPPBP16860 134 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CLRN1P58418 232 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CD83Q01151 205 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR4C15Q8NGM1 316 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CDS1Q92903 461 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 MYEOVQ96EZ4 313 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 SCGB3A2Q96PL1 93 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR7D2Q96RA2 312 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 TAAR2Q9P1P5 351 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 EIF3KQ9UBQ5 218 aaKnown RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC5A10A0PJK1 596 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CD8B2A6NJW9 211 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 RGS9O75916 674 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CD8BP10966 210 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CPMP14384 443 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 ZNF26P17031 533 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 PTGER1P34995 402 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 PXNP49023 591 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CTXN1P60606 82 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 SWI5Q1ZZU3 235 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 RLN3Q8WXF3 142 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CNOT2Q9NZN8 540 aaKnown RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 C17orf105B2RV13 164 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 RBMXL2O75526 392 aaKnown RBP13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 AIFM1O95831 613 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 CSN2P05814 226 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 REEP5Q00765 189 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 DEFB133Q30KQ1 61 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 DCST2Q5T1A1 773 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 LRIF1Q5T3J3 769 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 C19orf43Q9BQ61 176 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
PCDHGA11-201ENST00000398587 WASHC1A8K0Z3 465 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 C12orf71A8MTZ7 269 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 GPX2P18283 190 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 DPP6P42658 865 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 XCR1P46094 333 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 MFSD13AQ14CX5 517 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 WASH2PQ6VEQ5 465 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 Q8N402 240 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 CHFRQ96EP1 664 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 MED11Q9P086 117 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 ENPP5Q9UJA9 477 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 CA5BQ9Y2D0 317 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.27
PCDHGA11-201ENST00000398587 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 KCNK5O95279 499 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 PNMTP11086 282 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 PRPS1P60891 318 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF283Q8N7M2 679 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 B3GNT7Q8NFL0 401 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 FAM174AQ8TBP5 190 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 KIAA1143Q96AT1 154 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 TEX37Q96LM6 180 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 EVA1AQ9H8M9 152 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 CXXC1Q9P0U4 656 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 SRPK3Q9UPE1 567 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 H0YGG7 62 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 GFYI3L273 518 aa13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 SRPX2O60687 465 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF432O94892 652 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms