RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TRIOBPQ9H2D6 2365 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 SOX17Q9H6I2 414 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF430Q9H8G1 570 aaPredicted RBP6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 LATS2Q9NRM7 1088 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM248Q9NWD8 314 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM181Q9P2C4 612 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MOKQ9UQ07 419 aa6.22□□□□□ -1.41
TM9SF4-202ENST00000398022 MCM3APO60318 1980 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 YJEFN3A6XGL0 299 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 PDHXO00330 501 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 FADS1O60427 444 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 IFNGR1P15260 489 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 COMPP49747 757 aaPredicted RBP6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 BDH1Q02338 343 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 SPOCK1Q08629 439 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 TECRLQ5HYJ1 363 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 NCR3LG1Q68D85 454 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 ACSM5Q6NUN0 579 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 THSD4Q6ZMP0 1018 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 STX19Q8N4C7 294 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 SPPL2AQ8TCT8 520 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 CANT1Q8WVQ1 401 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 RAB24Q969Q5 203 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 HAVCR1Q96D42 359 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 NARS2Q96I59 477 aaKnown RBP6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 GPR78Q96P69 363 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 DIRC2Q96SL1 478 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 HBEGFQ99075 208 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 EMC7Q9NPA0 242 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 OLAHQ9NV23 265 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 ASB1Q9Y576 335 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 HSPE1-MOB4S4R3N1 261 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 SHROOM3Q8TF72 1996 aa6.21□□□□□ -1.41
TM9SF4-202ENST00000398022 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CROCCQ5TZA2 2017 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CLEC18AA5D8T8 446 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 NEMP2A6NFY4 417 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 FAM170BA6NMN3 283 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CLCA1A8K7I4 914 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 K7EQM0 130 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 WWP2O00308 870 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 LY86O95711 162 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 PAK4O96013 591 aaPredicted RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 HOXC4P09017 264 aaPredicted RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 MYF5P13349 255 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC2A4P14672 509 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 TACR2P21452 398 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 GLRA1P23415 457 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 EEF1B2P24534 225 aaKnown RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 APEX1P27695 318 aaKnown RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 GABRB3P28472 473 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SSTR2P30874 369 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 MAS1LP35410 378 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CXCR3P49682 368 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 GPR143P51810 404 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 UGT2B15P54855 530 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 AKIRIN2Q53H80 203 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CLEC18BQ6UXF7 455 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ALKAL1Q6UXT8 129 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CHRDL2Q6WN34 429 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC35D2Q76EJ3 337 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC16A14Q7RTX9 510 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SERINC5Q86VE9 423 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CLEC18CQ8NCF0 446 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SPATA22Q8NHS9 363 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 TFAP2CQ92754 450 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 C1GALT1C1Q96EU7 318 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 MVB12AQ96EY5 273 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 SMARCD1Q96GM5 515 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 WFIKKN1Q96NZ8 548 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF607Q96SK3 696 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ANKRD19PQ9H560 264 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 KRCC1Q9NPI7 259 aaPredicted RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 RBM22Q9NW64 420 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■■■■ 29.3
TM9SF4-202ENST00000398022 RBPJLQ9UBG7 517 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 FBXW2Q9UKT8 454 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 FAM234BA2RU67 622 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 KPNA3O00505 521 aaPredicted RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 NRP1O14786 923 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 TPST1O60507 370 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 C5AR1P21730 350 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 MYF6P23409 242 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 HTR1BP28222 390 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CD80P33681 288 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 PSMB10P40306 273 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 RGS6P49758 472 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CSRP3P50461 194 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CCR8P51685 355 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ABLIM2Q6H8Q1 611 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 EIF3MQ7L2H7 374 aaKnown RBP6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 GPALPP1Q8IXQ4 340 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 EDEM1Q92611 657 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 ISOC1Q96CN7 298 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 C16orf70Q9BSU1 422 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 HTATIP2Q9BUP3 242 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 CSTL1Q9H114 145 aa6.21□□□□□ -1.42
TM9SF4-202ENST00000398022 TTYH1Q9H313 450 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms