RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TESK1Q15569 626 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 UGT3A2Q3SY77 523 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 CYP27C1Q4G0S4 372 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 FCRL1Q96LA6 429 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 TSSK3Q96PN8 268 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 IQCGQ9H095 443 aaKnown RBP16.6■□□□□ 0.25
FXN-203ENST00000396366 MED11Q9P086 117 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 DKKL1Q9UK85 242 aa16.6■□□□□ 0.25
FXN-203ENST00000396366 MAP1AP78559 2803 aaPredicted RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 CLCA1A8K7I4 914 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 LSM1O15116 133 aaKnown RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 SLITRK5O94991 958 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 IGKV1D-16P01601 117 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 NUDT17P0C025 328 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 EFNA1P20827 205 aaPredicted RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 CTSSP25774 331 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 DPP4P27487 766 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 ARRB2P32121 409 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 GABRA3P34903 492 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 EVI2BP34910 448 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 GCKP35557 465 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 CLDN18P56856 261 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 B3GALT5-AS1P59052 145 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 RPL38P63173 70 aaKnown RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 STX5Q13190 355 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 RCAN2Q14206 197 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 GALNTL6Q49A17 601 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 ARL13AQ5H913 290 aaPredicted RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 ZCCHC23Q6ZST2 131 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 MARCH3Q86UD3 253 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 EXOC3L1Q86VI1 746 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 AGR3Q8TD06 166 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 TCP10LQ8TDR4 215 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 PIK3R3Q92569 461 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 RNASE6Q93091 150 aaKnown RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 METTL2AQ96IZ6 378 aaKnown RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 SFXN2Q96NB2 322 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 LMF2Q9BU23 707 aaKnown RBP16.59■□□□□ 0.25
FXN-203ENST00000396366 EQTNQ9NQ60 294 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 MKS1Q9NXB0 559 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 PPP4R1LQ9P1A2 415 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 LGALS13Q9UHV8 139 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 MID2Q9UJV3 735 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 TRAF6Q9Y4K3 522 aa16.59■□□□□ 0.25
FXN-203ENST00000396366 MPDZO75970 2070 aa16.58■□□□□ 0.25
FXN-203ENST00000396366 MED12LQ86YW9 2145 aa16.58■□□□□ 0.25
FXN-203ENST00000396366 ANKHD1Q8IWZ3 2542 aaKnown RBP16.58■□□□□ 0.25
FXN-203ENST00000396366 PDPK1O15530 556 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 CTAG2O75638 210 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 FGF4P08620 206 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 DGKQP52824 942 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 PSPHP78330 225 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 DECR1Q16698 335 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 ENPP6Q6UWR7 440 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 ADGRE4PQ86SQ3 457 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 GALNT10Q86SR1 603 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 DDIASQ8IXT1 998 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
FXN-203ENST00000396366 FADS6Q8N9I5 356 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 OR2M3Q8NG83 312 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 OR4K17Q8NGC6 315 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 AENQ8WTP8 325 aaKnown RBP16.58■□□□□ 0.24
FXN-203ENST00000396366 DUSP19Q8WTR2 217 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 NUDT8Q8WV74 236 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 TWIST2Q8WVJ9 160 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 TRMOQ9BU70 441 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 LIME1Q9H400 295 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 REEP4Q9H6H4 257 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 SLC24A3Q9HC58 644 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 DNAJB12Q9NXW2 375 aaKnown RBP16.58■□□□□ 0.24
FXN-203ENST00000396366 SH3BP4Q9P0V3 963 aa16.58■□□□□ 0.24
FXN-203ENST00000396366 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.58■□□□□ 0.24
FXN-203ENST00000396366 MRPS18CQ9Y3D5 142 aaKnown RBP16.58■□□□□ 0.24
FXN-203ENST00000396366 V9GYY5 206 aaPredicted RBP16.58■□□□□ 0.24
FXN-203ENST00000396366 EEF1E1-BLOC1S5C9J1V9 151 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 PIP5K1BO14986 540 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 EEF1E1O43324 174 aaKnown RBP16.57■□□□□ 0.24
FXN-203ENST00000396366 NPHS1O60500 1241 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 IL33O95760 270 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 CHEK2O96017 543 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 TMIGD3P0DMS9 266 aaPredicted RBP16.57■□□□□ 0.24
FXN-203ENST00000396366 ZNF708P17019 499 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 GPC1P35052 558 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 PRKAG1P54619 331 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 MRPS22P82650 360 aaKnown RBP16.57■□□□□ 0.24
FXN-203ENST00000396366 IFFO1Q0D2I5 559 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 FBXL19-AS1Q494R0 122 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 AAGABQ6PD74 315 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 APOOLQ6UXV4 268 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 RNF165Q6ZSG1 346 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 FBXO30Q8TB52 745 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 INTS12Q96CB8 462 aaKnown RBP16.57■□□□□ 0.24
FXN-203ENST00000396366 PPCDCQ96CD2 204 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 C16orf58Q96GQ5 468 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 CCT7Q99832 543 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 GPATCH1Q9BRR8 931 aaKnown RBP16.57■□□□□ 0.24
FXN-203ENST00000396366 Q9N2J8 555 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 JKAMPQ9P055 326 aa16.57■□□□□ 0.24
FXN-203ENST00000396366 CLCF1Q9UBD9 225 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms