RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 RNF175Q8N4F7 328 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 OR2M3Q8NG83 312 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 OR7G3Q8NG95 312 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 RGMAQ96B86 450 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 TMCO6Q96DC7 493 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 CMTM7Q96FZ5 175 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 COL21A1Q96P44 957 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 DHRS9Q9BPW9 319 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 LRRC1Q9BTT6 524 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 POTEKPQ9BYX7 375 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 STMN4Q9H169 189 aaPredicted RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 DDX31Q9H8H2 851 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 LYARQ9NX58 379 aaKnown RBP12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 NPAP1Q9NZP6 1156 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 SLC17A6Q9P2U8 582 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 XPR1Q9UBH6 696 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 AP4B1Q9Y6B7 739 aa12.12□□□□□ -0.47
VCPKMT-201ENST00000395859 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 NDUFS8O00217 210 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CBX7O95931 251 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CXCR5P32302 372 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 PPICP45877 212 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 FNTAP49354 379 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CTBP2P56545 445 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 RPS3AP61247 264 aaKnown RBP12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 MAP4K2Q12851 820 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CHIT1Q13231 466 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CRYMQ14894 314 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 TGFBIQ15582 683 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 PRICKLE4Q2TBC4 344 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 MIDNQ504T8 468 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 PAGE2BQ5JRK9 111 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 ADAMTSL2Q86TH1 951 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 STK32CQ86UX6 486 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 ANKRD49Q8WVL7 239 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 GCDHQ92947 438 aaPredicted RBP12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 TMBIM1Q969X1 311 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 ESAMQ96AP7 390 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 DSN1Q9H410 356 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 FOLH1BQ9HBA9 442 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 PLAC1Q9HBJ0 212 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 TMEFF2Q9UIK5 374 aaPredicted RBP12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 CFL2Q9Y281 166 aa12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 GPR55Q9Y2T6 319 aaPredicted RBP12.11□□□□□ -0.47
VCPKMT-201ENST00000395859 H3BML4 177 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 ABCD4O14678 606 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 ZNF23P17027 643 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 HK1P19367 917 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 SERPINB1P30740 379 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 EMDP50402 254 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 ARFIP2P53365 341 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 GANABQ14697 944 aaKnown RBP12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 PDK4Q16654 411 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 GLYR1Q49A26 553 aaPredicted RBP12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 FBXO48Q5FWF7 155 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 OR52E8Q6IFG1 317 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 FAM45BPQ6NSW5 357 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 FAM111BQ6SJ93 734 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 TREML4Q6UXN2 200 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 B3GLCTQ6Y288 498 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 Q6ZSR9 355 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 MUC15Q8N387 334 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 FAM45AQ8TCE6 357 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 MAT2BQ9NZL9 334 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 TSC22D4Q9Y3Q8 395 aa12.1□□□□□ -0.47
VCPKMT-201ENST00000395859 GOLGA8MH3BSY2 632 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 STK16O75716 305 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 WISP3O95389 354 aaPredicted RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 PLGP00747 810 aaPredicted RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 FAM58BPP0C7Q3 252 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 CT45A8P0DMV1 189 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 CT45A9P0DMV2 189 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 CPMP14384 443 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 HSPA7P48741 367 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 XKP51811 444 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 IRF8Q02556 426 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 EXOSC7Q15024 291 aaKnown RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 HIST2H2ACQ16777 129 aaPredicted RBP12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 ZSWIM7Q19AV6 140 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 CT45A2Q5DJT8 189 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 CDKL4Q5MAI5 379 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 TEDDM1Q5T9Z0 273 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 HIST2H2AA3Q6FI13 130 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 MED27Q6P2C8 311 aa12.09□□□□□ -0.47
VCPKMT-201ENST00000395859 GALNT10Q86SR1 603 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms