RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 DNMT3AQ9Y6K1 912 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 LRRN3E7EW58 273 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 HMGN4O00479 90 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 IFNA7P01567 189 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 HIST1H2ABP04908 130 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 CERS1P27544 350 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 SLC6A6P31641 620 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 PYCR1P32322 319 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 VIPR2P41587 438 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 LIM2P55344 173 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 RASSF6Q6ZTQ3 369 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 ABHD13Q7L211 337 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 HIST3H2AQ7L7L0 130 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 TMEM150AQ86TG1 271 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 AMIGO1Q86WK6 493 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 OR2L5Q8NG80 312 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 OR9A2Q8NGT5 310 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 HIST1H2ACQ93077 130 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 AMDHD1Q96NU7 426 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 ERMAPQ96PL5 475 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 ALG8Q9BVK2 526 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 BTBD2Q9BX70 525 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 ZDHHC5Q9C0B5 715 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 LRRN3Q9H3W5 708 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 TMEM138Q9NPI0 162 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 IKZF2Q9UKS7 526 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
UBE2D3-209ENST00000394804 TMEM129A0AVI4 362 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ZNF879B4DU55 563 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 GABRPO00591 440 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 GRK5P34947 590 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ACTC1P68032 377 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ACTA1P68133 377 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 HOXC5Q00444 222 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 CDK3Q00526 305 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ID2Q02363 134 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 PRDX1Q06830 199 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 PIP5KL1Q5T9C9 394 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 VRK2Q86Y07 508 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 TMC8Q8IU68 726 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 CCDC28AQ8IWP9 274 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 TIGD4Q8IY51 512 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 YIPF7Q8N8F6 280 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 OR51A7Q8NH64 312 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ARRDC3Q96B67 414 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 OR7D2Q96RA2 312 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 VN1R3Q9BXE9 311 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 IGFLR1Q9H665 355 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 TRAPPC4Q9Y296 219 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 TRAPPC13A5PLN9 417 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 GNB5O14775 395 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 LATO43561 262 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 EDNRAP25101 427 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ETV5P41161 510 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ARL4DP49703 201 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ETV1P50549 477 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 PSMD4P55036 377 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ERVK-21P61565 698 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 BIKQ13323 160 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ASPGQ86U10 573 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 JAZF1Q86VZ6 243 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 SLC44A3Q8N4M1 653 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 MACROD1Q9BQ69 325 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ZBP1Q9H171 429 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 SPNS1Q9H2V7 528 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 RANBP3Q9H6Z4 567 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 SYNDIG1Q9H7V2 258 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 C14orf105Q9NVL8 296 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 UCKL1Q9NWZ5 548 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 TMPRSS11EQ9UL52 423 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 LOC102723532A0A0G2JNH3 316 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 K7ESM1 405 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 KIAA0355O15063 1070 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 OR6A2O95222 327 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ZNF24P17028 368 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ACVR1BP36896 505 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 MLLT3P42568 568 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 OMPP47874 163 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 CHRNEQ04844 493 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ZNF234Q14588 700 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ACSM5Q6NUN0 579 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 OLIG3Q7RTU3 272 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 LRRC56Q8IYG6 542 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 SRRQ9GZT4 340 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 QRSL1Q9H0R6 528 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 FBXL12Q9NXK8 326 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ZNF224Q9NZL3 707 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 MUTYHQ9UIF7 546 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 ICKQ9UPZ9 632 aa10.97□□□□□ -0.65
UBE2D3-209ENST00000394804 A6NL46 340 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 NDUFB5O43674 189 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 HLA-DQA2P01906 255 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 CPEP16870 476 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 PON3Q15166 354 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 SEC23BQ15437 767 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 SSX1Q16384 188 aa10.96□□□□□ -0.65
UBE2D3-209ENST00000394804 ZER1Q7Z7L7 766 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms