RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 S100A3P33764 101 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 HPCAL1P37235 193 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 C21orf58P58505 322 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 ZNF763Q0D2J5 394 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 ZNF791Q3KP31 576 aaPredicted RBP17.09■□□□□ 0.33
SNCB-202ENST00000393693 PRAMEF20Q5VT98 475 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 LYPD8Q6UX82 237 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 MSANTD1Q6ZTZ1 278 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 COMMD6Q7Z4G1 85 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 C9orf40Q8IXQ3 194 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 CLHC1Q8NHS4 586 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 SENP5Q96HI0 755 aaPredicted RBP17.09■□□□□ 0.33
SNCB-202ENST00000393693 TEX37Q96LM6 180 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 KCNC2Q96PR1 638 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 FOXC2Q99958 501 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 GPATCH1Q9BRR8 931 aaKnown RBP17.09■□□□□ 0.33
SNCB-202ENST00000393693 TBCDQ9BTW9 1192 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 SORBS1Q9BX66 1292 aaKnown RBP17.09■□□□□ 0.33
SNCB-202ENST00000393693 CXXC4Q9H2H0 198 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 RMND5AQ9H871 391 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 SH2D2AQ9NP31 389 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 ADAM29Q9UKF5 820 aa17.09■□□□□ 0.33
SNCB-202ENST00000393693 LRATO95237 230 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 CPN2P22792 545 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 PSME3P61289 254 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
SNCB-202ENST00000393693 FOLH1Q04609 750 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 NFYCQ13952 458 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 CEBPEQ15744 281 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 MPEG1Q2M385 716 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 SLC25A35Q3KQZ1 300 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 TIGD2Q4W5G0 525 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 CCNYL2Q5T2Q4 361 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 SLC22A10Q63ZE4 541 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 SEM1Q6ZVN7 128 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 R3HCC1LQ7Z5L2 792 aaKnown RBP17.08■□□□□ 0.32
SNCB-202ENST00000393693 NUDT13Q86X67 352 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 TGIF2LYQ8IUE0 185 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 CDC26Q8NHZ8 85 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 ROGDIQ9GZN7 287 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 SLC6A15Q9H2J7 730 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 PROK2Q9HC23 129 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 SLC52A3Q9NQ40 469 aa17.08■□□□□ 0.32
SNCB-202ENST00000393693 C9JVG2 144 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 HCN1O60741 890 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 IGKV3-11P04433 115 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 KLK1P06870 262 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 HOXB4P17483 251 aaPredicted RBP17.07■□□□□ 0.32
SNCB-202ENST00000393693 HIST1H1TP22492 207 aaPredicted RBP17.07■□□□□ 0.32
SNCB-202ENST00000393693 TACR1P25103 407 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 KIR2DL3P43628 341 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 STT3AP46977 705 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 IGLV3-21P80748 117 aaPredicted RBP17.07■□□□□ 0.32
SNCB-202ENST00000393693 FAM174BQ3ZCQ3 159 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 RIPPLY2Q5TAB7 128 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 IKBIPQ70UQ0 350 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 GPR180Q86V85 440 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 DPP10Q8N608 796 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 KRTCAP2Q8N6L1 136 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 NUBPLQ8TB37 319 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 PAQR8Q8TEZ7 354 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 NINJ1Q92982 152 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 VPS33AQ96AX1 596 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 MTERF3Q96E29 417 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 DGAT2Q96PD7 388 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 ZNF703Q9H7S9 590 aaPredicted RBP17.07■□□□□ 0.32
SNCB-202ENST00000393693 MYNNQ9NPC7 610 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 CRIM1Q9NZV1 1036 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 ST6GALNAC2Q9UJ37 374 aa17.07■□□□□ 0.32
SNCB-202ENST00000393693 C15orf38-AP3S2A0A0A6YYH1 394 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 LRRC3CA6NJW4 275 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 KDM4EB2RXH2 506 aaPredicted RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 PLPP1O14494 284 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 GUCY1B2O75343 617 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 PRKRAO75569 313 aaKnown RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 PGRP06401 933 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 COX7A2P14406 83 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 KLK2P20151 261 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 UQCRC1P31930 480 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 TRPC1P48995 793 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 WNT3P56703 355 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 TRA2BP62995 288 aaKnown RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 LRRC74AQ0VAA2 488 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 PGS1Q32NB8 556 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 TRMT5Q32P41 509 aaKnown RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 OR4C11Q6IEV9 310 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 ARPINQ7Z6K5 226 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 RIMKLAQ8IXN7 391 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 ULK2Q8IYT8 1036 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 RELL2Q8NC24 303 aaPredicted RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 VPS37AQ8NEZ2 397 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 SLC22A8Q8TCC7 542 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 C16orf78Q8WTQ4 265 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 UTP4Q969X6 686 aaKnown RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 SPACA9Q96E40 222 aaPredicted RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 JSRP1Q96MG2 331 aaPredicted RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 OR52E6Q96RD3 313 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 CLEC4MQ9H2X3 399 aaPredicted RBP17.06■□□□□ 0.32
SNCB-202ENST00000393693 ZFP64Q9NPA5 681 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms