RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 UBXN1Q04323 297 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 ORC2Q13416 577 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 C2orf76Q3KRA6 126 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 LRIT3Q3SXY7 679 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 OR2B11Q5JQS5 317 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF57Q68EA5 555 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 TRPM8Q7Z2W7 1104 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 TMEM179BQ7Z7N9 219 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 CNTN4Q8IWV2 1026 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 LRRC17Q8N6Y2 441 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 LINC01555Q8NAE3 123 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 SNX21Q969T3 373 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 DHTKD1Q96HY7 919 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 VPS39Q96JC1 886 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF184Q99676 751 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 FTHL17Q9BXU8 183 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 NACA2Q9H009 215 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 MID1IP1Q9NPA3 183 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 MYOZ2Q9NPC6 264 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 CWC25Q9NXE8 425 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 TDRKHQ9Y2W6 561 aaKnown RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 EXOSC1Q9Y3B2 195 aaKnown RBP2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 CDC42BPBQ9Y5S2 1711 aa2.36□□□□□ -2.03
SNORA40.3-201ENST00000390964 TMEM89A2RUT3 159 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 FBLL1A6NHQ2 334 aaKnown RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 H3BMH7 237 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 TM9SF1O15321 606 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 HTATSF1O43719 755 aaKnown RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 PNPP00491 289 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 IGFBP1P08833 259 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 ABHD2P08910 425 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 SLC35G4P0C7Q5 338 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF17P17021 662 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 PTBP1P26599 531 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 CDH5P33151 784 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 RPS8P62241 208 aaKnown RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 OC90Q02509 493 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZP4Q12836 540 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 RPA4Q13156 261 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 KCNJ11Q14654 390 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 CARTPTQ16568 116 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF658BQ4V348 819 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 BEND6Q5SZJ8 279 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 DCST2Q5T1A1 773 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 LIPKQ5VXJ0 399 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 OR5M10Q6IEU7 315 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 IGFL3Q6UXB1 125 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 HACD2Q6Y1H2 254 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 NET1Q7Z628 596 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 TMEM185AQ8NFB2 350 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 WDR36Q8NI36 951 aaKnown RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 COQ7Q99807 217 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 EBF4Q9BQW3 602 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 DDX47Q9H0S4 455 aaKnown RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 DUS2Q9NX74 493 aaKnown RBP2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 L3MBTL1Q9Y468 752 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 TEX264Q9Y6I9 313 aa2.35□□□□□ -2.03
SNORA40.3-201ENST00000390964 A0A0U1RRA0 63 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 E9PLD3 99 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 PDXKO00764 312 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 IMPA2O14732 288 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 LYPLA1O75608 230 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 CABYRO75952 493 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 SEMG1P04279 462 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 PGK2P07205 417 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 STSP08842 583 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 HMOX1P09601 288 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF32P17041 273 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 FUT3P21217 361 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 EMDP50402 254 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 SRYQ05066 204 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 BCL2L1Q07817 233 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 DPYSQ14117 519 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 ELAVL3Q14576 367 aaKnown RBP2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 HFEQ30201 348 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 AGKQ53H12 422 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 FAM159AQ6UWV7 190 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 OLFM4Q6UX06 510 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF562Q6V9R5 426 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 PAQR9Q6ZVX9 377 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 P4HA3Q7Z4N8 544 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 VPS36Q86VN1 386 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 MKXQ8IYA7 352 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 CCDC36Q8IYA8 594 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 BBS1Q8NFJ9 593 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 CCSER1Q9C0I3 900 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 GHRLQ9UBU3 117 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 BCAP29Q9UHQ4 241 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF221Q9UK13 617 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 ZNF490Q9ULM2 529 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 DUSP12Q9UNI6 340 aa2.34□□□□□ -2.03
SNORA40.3-201ENST00000390964 METP08581 1390 aa2.34□□□□□ -2.04
SNORA40.3-201ENST00000390964 ANKRD30BQ9BXX2 1392 aa2.34□□□□□ -2.04
SNORA40.3-201ENST00000390964 DHRS7CA6NNS2 312 aa2.33□□□□□ -2.04
SNORA40.3-201ENST00000390964 TMEM110-MUSTN1A8MSY1 372 aa2.33□□□□□ -2.04
SNORA40.3-201ENST00000390964 VEGFDO43915 354 aa2.33□□□□□ -2.04
SNORA40.3-201ENST00000390964 ZNF254O75437 659 aa2.33□□□□□ -2.04
SNORA40.3-201ENST00000390964 IGKV3-11P04433 115 aa2.33□□□□□ -2.04
SNORA40.3-201ENST00000390964 ASNSP08243 561 aa2.33□□□□□ -2.04
SNORA40.3-201ENST00000390964 CYP11B1P15538 503 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms