RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NPSR1Q6W5P4 371 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 FRMD7Q6ZUT3 714 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 TDRPQ86YL5 185 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 C9orf106Q8NAJ2 232 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 OR7G2Q8NG99 324 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.79□□□□□ -0.522e-65■■■■■ 53.9
RPAIN-202ENST00000381208 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.522e-7■■■■■ 32.7
RPAIN-202ENST00000381208 ZNF764Q96H86 408 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-202ENST00000381208 DACH2Q96NX9 599 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 TUBA1CQ9BQE3 449 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 TRMOQ9BU70 441 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 PTGES2Q9H7Z7 377 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 L2HGDHQ9H9P8 463 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 DDX18Q9NVP1 670 aaKnown RBP11.79□□□□□ -0.52
RPAIN-202ENST00000381208 PPP4R1LQ9P1A2 415 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 CBLCQ9ULV8 474 aa11.79□□□□□ -0.52
RPAIN-202ENST00000381208 MPDZO75970 2070 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 CLCA1A8K7I4 914 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 KDM4EB2RXH2 506 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-202ENST00000381208 NPIPB8E9PQR5 432 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 G3V2L1 256 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 SLC28A1O00337 649 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 CTIFO43310 598 aaKnown RBP11.78□□□□□ -0.52
RPAIN-202ENST00000381208 PROCP04070 461 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 NEFHP12036 1026 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 ZNF708P17019 499 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 PRPH2P23942 346 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 EVI2BP34910 448 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 CPA2P48052 419 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 LHX2P50458 406 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 WNT3P56703 355 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 PSG6Q00889 435 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 OCRLQ01968 901 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 SRYQ05066 204 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 MTERF4Q7Z6M4 381 aaKnown RBP11.78□□□□□ -0.52
RPAIN-202ENST00000381208 CDC20BQ86Y33 519 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 GRAMD2AQ8IUY3 354 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 OR2L13Q8N349 312 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 MEIOBQ8N635 442 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 CCDC63Q8NA47 563 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 MBD6Q96DN6 1003 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 ALPK1Q96QP1 1244 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 KCNA7Q96RP8 456 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 RHOXF2Q9BQY4 288 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 RBM24Q9BX46 236 aaKnown RBP11.78□□□□□ -0.52
RPAIN-202ENST00000381208 OXSMQ9NWU1 459 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
RPAIN-202ENST00000381208 CLCF1Q9UBD9 225 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 STOML1Q9UBI4 398 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 FBXL2Q9UKC9 423 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 EMCNQ9ULC0 261 aa11.78□□□□□ -0.52
RPAIN-202ENST00000381208 ITPR3Q14573 2671 aa11.77□□□□□ -0.52
RPAIN-202ENST00000381208 MED12Q93074 2177 aa11.77□□□□□ -0.52
RPAIN-202ENST00000381208 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.52
RPAIN-202ENST00000381208 ZFHX3Q15911 3703 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 UBFD1O14562 309 aaKnown RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 COPEO14579 308 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 RGS14O43566 566 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 HCRTR2O43614 444 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 ZIC3O60481 467 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 PLIN3O60664 434 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 SLU7O95391 586 aaKnown RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 JUNP05412 331 aaKnown RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 FAM153BP0C7A2 387 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 MC3RP41968 323 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 GAS1P54826 345 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 FOXA1P55317 472 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 CLDN18P56856 261 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 FGFBP1Q14512 234 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 FAM153CQ494X1 144 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 VPS26BQ4G0F5 336 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 LIPMQ5VYY2 423 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 NOXRED1Q6NXP6 359 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 RNF165Q6ZSG1 346 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 P4HA3Q7Z4N8 544 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 FADS6Q8N9I5 356 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 CEP70Q8NHQ1 597 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 CDC26Q8NHZ8 85 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 EFHD2Q96C19 240 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 ELP4Q96EB1 424 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 DOCK7Q96N67 2140 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 YIPF4Q9BSR8 244 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 LMF2Q9BU23 707 aaKnown RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 GLIPR2Q9H4G4 154 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 ANKRA2Q9H9E1 313 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-202ENST00000381208 NDRG3Q9UGV2 375 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 PACSIN3Q9UKS6 424 aa11.77□□□□□ -0.53
RPAIN-202ENST00000381208 UPK1AO00322 258 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 MSTNO14793 375 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 CASKO14936 926 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 KCNH1O95259 989 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 PSMG1O95456 288 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 IL33O95760 270 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 CHEK2O96017 543 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 CD99P14209 185 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 CPA3P15088 417 aa11.76□□□□□ -0.53
RPAIN-202ENST00000381208 SLCO1A2P46721 670 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms