RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ZNF730Q6ZMV8 503 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 PLEKHM3Q6ZWE6 761 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 PRSS41Q7RTY9 318 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MRGPREQ86SM8 312 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 RANBP3LQ86VV4 465 aaPredicted RBP21.55■■□□□ 1.04
VPS16-201ENST00000380443 SFTPA2Q8IWL1 248 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 ARL14Q8N4G2 192 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 DYNC2LI1Q8TCX1 351 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MCHR1Q99705 422 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 CHRNA10Q9GZZ6 450 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 SELENONQ9NZV5 590 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MKLN1Q9UL63 735 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 MRPS33Q9Y291 106 aaKnown RBP21.55■■□□□ 1.04
VPS16-201ENST00000380443 HYKKA2RU49 373 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 LDB3O75112 727 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 RPLP0P05388 317 aaKnown RBP21.55■■□□□ 1.04
VPS16-201ENST00000380443 NR4A1P22736 598 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 LIPAP38571 399 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 CAPZBP47756 277 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 BMXP51813 675 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 EEF1A1P68104 462 aaKnown RBP21.55■■□□□ 1.04
VPS16-201ENST00000380443 RHAGQ02094 409 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 GAS6Q14393 721 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 TIMM50Q3ZCQ8 353 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 DCST2Q5T1A1 773 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 GARNL3Q5VVW2 1013 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 SLCO6A1Q86UG4 719 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 FRMD1Q8N878 549 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 TEX47Q8TBZ9 253 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 RLN3Q8WXF3 142 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 ANKRD9Q96BM1 317 aaPredicted RBP21.55■■□□□ 1.04
VPS16-201ENST00000380443 TMEM80Q96HE8 168 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 IL4I1Q96RQ9 567 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 TEX12Q9BXU0 123 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 FAM60AQ9NP50 221 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 ADAP2Q9NPF8 381 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 SEMA4GQ9NTN9 838 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 CA14Q9ULX7 337 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 SLC6A14Q9UN76 642 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 DOLKQ9UPQ8 538 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 B3GNT3Q9Y2A9 372 aa21.55■■□□□ 1.04
VPS16-201ENST00000380443 GPR55Q9Y2T6 319 aaPredicted RBP21.55■■□□□ 1.04
VPS16-201ENST00000380443 FAM170BA6NMN3 283 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 AIREO43918 545 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 TPST2O60704 377 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 FMO6PO60774 539 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 PROS1P07225 676 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 CSTF2P33240 577 aaKnown RBP eCLIP21.54■■□□□ 1.04
VPS16-201ENST00000380443 CLK1P49759 484 aaKnown RBP21.54■■□□□ 1.04
VPS16-201ENST00000380443 ZNF846Q147U1 533 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 ARHGAP22Q7Z5H3 698 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 C17orf82Q86X59 251 aaPredicted RBP21.54■■□□□ 1.04
VPS16-201ENST00000380443 CLIP4Q8N3C7 705 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 COX18Q8N8Q8 333 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 OR5T3Q8NGG3 340 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 TPSD1Q9BZJ3 242 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 TMEM74BQ9NUR3 256 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 NLGN3Q9NZ94 848 aa21.54■■□□□ 1.04
VPS16-201ENST00000380443 A0A1B0GVG6 124 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 CPSF4LA6NMK7 179 aaKnown RBP21.53■■□□□ 1.04
VPS16-201ENST00000380443 SGK494L7N484 410 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 CHST10O43529 356 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 RNH1P13489 461 aaKnown RBP21.53■■□□□ 1.04
VPS16-201ENST00000380443 FPR3P25089 353 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 AVPR1BP47901 424 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 VBP1P61758 197 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 PPP1CAP62136 330 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 EFNB1P98172 346 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 FZD5Q13467 585 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 FAM53BQ14153 422 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 NR1D2Q14995 579 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 ARMCX4Q5H9R4 360 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 ZNF836Q6ZNA1 936 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 ZNF438Q7Z4V0 828 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 HMGN2P46Q86SG4 172 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 ZNF761Q86XN6 746 aaPredicted RBP21.53■■□□□ 1.04
VPS16-201ENST00000380443 TCEANCQ8N8B7 351 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 TMEM52Q8NDY8 209 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 ZHX1-C8orf76Q96EF9 292 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 SLC41A3Q96GZ6 507 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 ZNF285Q96NJ3 590 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 WDR12Q9GZL7 423 aaKnown RBP21.53■■□□□ 1.04
VPS16-201ENST00000380443 HMG20AQ9NP66 347 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 C2orf42Q9NWW7 574 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 TRIOO75962 3097 aa21.53■■□□□ 1.04
VPS16-201ENST00000380443 KRBA1A5PL33 1030 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 SLC9B1P1A6NJY1 282 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 M0R129 80 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 KIAA0513O60268 411 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 PTHP01270 115 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 WNT1P04628 370 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 STARD6P59095 220 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 POU6F2P78424 691 aaPredicted RBP21.52■■□□□ 1.04
VPS16-201ENST00000380443 ID2Q02363 134 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 ZSWIM7Q19AV6 140 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 TMEM44Q2T9K0 475 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 SLC27A4Q6P1M0 643 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 MBOAT2Q6ZWT7 520 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 USP43Q70EL4 1123 aa21.52■■□□□ 1.04
VPS16-201ENST00000380443 ADCK1Q86TW2 530 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms