RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 EEF1A1P68104 462 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 ZAR1Q86SH2 424 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 CCDC71Q8IV32 467 aaPredicted RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 AQP11Q8NBQ7 271 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 SLC7A13Q8TCU3 470 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 TSLPQ969D9 159 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 CCDC74BQ96LY2 380 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PRRC1Q96M27 445 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PITX2Q99697 317 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 YTHDF1Q9BYJ9 559 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 CTPS2Q9NRF8 586 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 POFUT2Q9Y2G5 429 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 IFT52Q9Y366 437 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 GMPPBQ9Y5P6 360 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 NPIPA5A0A0B4J1W7 369 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 A0A1W2PRQ8 180 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 NPIPA7E9PJI5 369 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PEX12O00623 359 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 BRINP1O60477 761 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 UGT2B17O75795 530 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 AK1P00568 194 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 NPIPA8P0DM63 369 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 RPP38P78345 283 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 DGCR6Q14129 220 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 LIN52Q52LA3 116 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 VWA2Q5GFL6 755 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 DCST1Q5T197 706 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 AP1ARQ63HQ0 302 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 TCEAL6Q6IPX3 200 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 NPSR1Q6W5P4 371 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 Q6ZPB1 254 aaPredicted RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PRR23CQ6ZRP0 262 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 SATL1Q86VE3 508 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF615Q8N8J6 731 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 OR4N2Q8NGD1 307 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 C16orf52Q8NHV5 167 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PTPMT1Q8WUK0 201 aaPredicted RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 TCEAL3Q969E4 200 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 GTPBP3Q969Y2 492 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF578Q96N58 590 aaPredicted RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PELOQ9BRX2 385 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 SLC13A4Q9UKG4 626 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 TRIM64CA6NLI5 447 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 PRAMEF2O60811 474 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 THBS1P07996 1170 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 AVPR2P30518 371 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 SMIM11AP58511 58 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 DAB2P98082 770 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 HOXC5Q00444 222 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 RHAGQ02094 409 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 ACY1Q03154 408 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 BIKQ13323 160 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 MINDY4Q4G0A6 757 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 C6orf141Q5SZD1 244 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 ARHGAP40Q5TG30 622 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 QSOX2Q6ZRP7 698 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 OR6C1Q96RD1 312 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 FNDC11Q9BVV2 318 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 OR10A5Q9H207 317 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 TRIM45Q9H8W5 580 aaPredicted RBP16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 TMCC3Q9ULS5 477 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
THUMPD2-201ENST00000378727 SH3PXD2BA1X283 911 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 C17orf105B2RV13 164 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 FAAHO00519 579 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 TIAF1O95411 115 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 IGKV1D-16P01601 117 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 AGXTP21549 392 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 TRHRP34981 398 aaPredicted RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 MPLP40238 635 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 RPS6KA3P51812 740 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 LARS2Q15031 903 aaKnown RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 MFSD4BQ5TF39 518 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 RHBDD2Q6NTF9 364 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 PODNL1Q6PEZ8 512 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 SLC38A9Q8NBW4 561 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 CNIH3Q8TBE1 160 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 HDAC2Q92769 488 aaKnown RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 HRASLS5Q96KN8 279 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 SLC22A11Q9NSA0 550 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 AASSQ9UDR5 926 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 SOX30O94993 753 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 OXSR1O95747 527 aaPredicted RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 DBIP07108 87 aaKnown RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 CT45A8P0DMV1 189 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 CT45A9P0DMV2 189 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 TNNI3P19429 210 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 CRHBPP24387 322 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 NR1H2P55055 460 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 TUBA4AP68366 448 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 IL5RAQ01344 420 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 CDK5R2Q13319 367 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNHIT3Q15649 155 aaPredicted RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 NADK2Q4G0N4 442 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 CT45A2Q5DJT8 189 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 KLHL17Q6TDP4 642 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 COX15Q7KZN9 410 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 APLFQ8IW19 511 aaPredicted RBP16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 PARP8Q8N3A8 854 aa16.1■□□□□ 0.17
THUMPD2-201ENST00000378727 SETD9Q8NE22 299 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms