RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GRHL3Q8TE85 626 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 FAR1Q8WVX9 515 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 CDS1Q92903 461 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 OR51I1Q9H343 314 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 ASF1BQ9NVP2 202 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 SLAMF8Q9P0V8 285 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 LEF1Q9UJU2 399 aaPredicted RBP17.19■□□□□ 0.34
SSU72-203ENST00000378725 NDUFAF1Q9Y375 327 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 GMEB1Q9Y692 573 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 BOD1L1Q8NFC6 3051 aa17.19■□□□□ 0.34
SSU72-203ENST00000378725 A0A0G2JMM0 328 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 A0A1W2PPB8 328 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 A0A1W2PRS3 328 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 KIR3DP1A8MWS1 328 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 ASNA1O43681 348 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 TRIM3O75382 744 aaPredicted RBP17.18■□□□□ 0.34
SSU72-203ENST00000378725 SNX4O95219 450 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 PTGDSP41222 190 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 MVDP53602 400 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 PMP22Q01453 160 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 GTDC1Q4AE62 458 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 PRAMEF20Q5VT98 475 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 AP1ARQ63HQ0 302 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 SLC30A6Q6NXT4 461 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 FAM180AQ6UWF9 173 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 PRICKLE2Q7Z3G6 844 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 RNF130Q86XS8 419 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 CHDHQ8NE62 594 aaPredicted RBP17.18■□□□□ 0.34
SSU72-203ENST00000378725 OR5D16Q8NGK9 328 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 TPT1P8Q9HAU6 139 aa17.18■□□□□ 0.34
SSU72-203ENST00000378725 TRBV5-3A0A0A0MS03 114 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 G3V3Y1 287 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 ICOSLGO75144 302 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 GLSO94925 669 aaPredicted RBP17.17■□□□□ 0.34
SSU72-203ENST00000378725 AGR2O95994 175 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 DNASE1L1P49184 302 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 CASP9P55211 416 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 TLE1Q04724 770 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 HYAL4Q2M3T9 481 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 RNFT1Q5M7Z0 435 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 BICRALQ6AI39 1079 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 HEPHL1Q6MZM0 1159 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 FIGNL1Q6PIW4 674 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 DLEU7Q6UYE1 221 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 DNAJC14Q6Y2X3 702 aaPredicted RBP17.17■□□□□ 0.34
SSU72-203ENST00000378725 MTDHQ86UE4 582 aaKnown RBP17.17■□□□□ 0.34
SSU72-203ENST00000378725 RETREG3Q86VR2 466 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 MSRB3Q8IXL7 192 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 CCT8L2Q96SF2 557 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 G6PC3Q9BUM1 346 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 CCDC106Q9BWC9 280 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 MYLK2Q9H1R3 596 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 METTL7AQ9H8H3 244 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 IL1RL2Q9HB29 575 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 AGPAT4Q9NRZ5 378 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 FBXO34Q9NWN3 711 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 TUBA8Q9NY65 449 aaPredicted RBP17.17■□□□□ 0.34
SSU72-203ENST00000378725 SLC25A37Q9NYZ2 338 aa17.17■□□□□ 0.34
SSU72-203ENST00000378725 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.17■□□□□ 0.34
SSU72-203ENST00000378725 COL6A6A6NMZ7 2263 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 PRAMEF25A6NGN4 478 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 HMGN4O00479 90 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 FBP2O00757 339 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ANGPT2O15123 496 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 SLC28A2O43868 658 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 HS6ST1O60243 411 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 FADS1O60427 444 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 UNC5CO95185 931 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 UTS2O95399 124 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 AK1P00568 194 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 NGFRP08138 427 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 GUSBP08236 651 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 OR12D1P0DN82 309 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 KHKP50053 298 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 GAS1P54826 345 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 MAPRE2Q15555 327 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ARHGAP11BQ3KRB8 267 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 COX20Q5RI15 118 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 DCST2Q5T1A1 773 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 CCNJQ5T5M9 372 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 TNFAIP8L2Q6P589 184 aaPredicted RBP17.16■□□□□ 0.34
SSU72-203ENST00000378725 ZAR1Q86SH2 424 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ZNF605Q86T29 641 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 OR52N2Q8NGI0 321 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 XAGE5Q8WWM1 108 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 NR4A3Q92570 626 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 MIB2Q96AX9 1013 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 TMEM41AQ96HV5 264 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 SDF2Q99470 211 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 DOHHQ9BU89 302 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ZFP64Q9NPA5 681 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 EXD2Q9NVH0 621 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 FLRT3Q9NZU0 649 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 VAPAQ9P0L0 249 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ARMCX1Q9P291 453 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ABCG2Q9UNQ0 655 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 ARL2BPQ9Y2Y0 163 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 CAPN7Q9Y6W3 813 aa17.16■□□□□ 0.34
SSU72-203ENST00000378725 CNTRLQ7Z7A1 2325 aa17.15■□□□□ 0.34
SSU72-203ENST00000378725 CLIC1O00299 241 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms