RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GALNT11Q8NCW6 608 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 RNF138Q8WVD3 245 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 EFHD2Q96C19 240 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-202ENST00000378034 OR7D2Q96RA2 312 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 NODALQ96S42 347 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 DOHHQ9BU89 302 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 HHATLQ9HCP6 504 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 ABCG2Q9UNQ0 655 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 A0A096LPI6 279 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 PRAMEF25A6NGN4 478 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 SLC22A2O15244 555 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-202ENST00000378034 GLSO94925 669 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-202ENST00000378034 CYP4B1P13584 511 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 CAPN3P20807 821 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 DRD4P21917 467 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 DNASE1L1P49184 302 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 CLK3P49761 638 aaKnown RBP12.14□□□□□ -0.47
CKAP2-202ENST00000378034 KHKP50053 298 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 PLGLB1Q02325 96 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 FOXO1Q12778 655 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 C6orf10Q5SRN2 563 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 PRAMEF20Q5VT98 475 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 SLC22A16Q86VW1 577 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 ATCAYQ86WG3 371 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 CLEC4FQ8N1N0 589 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 FBXO30Q8TB52 745 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 CDS1Q92903 461 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
CKAP2-202ENST00000378034 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 ZFP64Q9NPA5 681 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 SAR1AQ9NR31 198 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 EXD2Q9NVH0 621 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 TUBA8Q9NY65 449 aaPredicted RBP12.14□□□□□ -0.47
CKAP2-202ENST00000378034 A0A0G2JMM0 328 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 A0A1W2PPB8 328 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 A0A1W2PRS3 328 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 KIR3DP1A8MWS1 328 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 G3V3Y1 287 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 CCDC22O60826 627 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 ICOSLGO75144 302 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 GSNP06396 782 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 NGFRP08138 427 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 GUSBP08236 651 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 SNRPB2P08579 225 aaKnown RBP12.13□□□□□ -0.47
CKAP2-202ENST00000378034 PTPN6P29350 595 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 SLC2A7Q6PXP3 512 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 ST6GALNAC3Q8NDV1 305 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 CHDHQ8NE62 594 aaPredicted RBP12.13□□□□□ -0.47
CKAP2-202ENST00000378034 ZFP90Q8TF47 636 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF597Q96LX8 424 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 TTTY12Q9BZ98 90 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 PAIP1Q9H074 479 aaKnown RBP12.13□□□□□ -0.47
CKAP2-202ENST00000378034 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 QPCTLQ9NXS2 382 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 KLRF1Q9NZS2 232 aa12.13□□□□□ -0.47
CKAP2-202ENST00000378034 LEF1Q9UJU2 399 aaPredicted RBP12.13□□□□□ -0.47
CKAP2-202ENST00000378034 TFECO14948 347 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SNX3O60493 162 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 IGKV1D-16P01601 117 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ELAVL4P26378 380 aaKnown RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 PTGDSP41222 190 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 TDGF1P3P51864 188 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SF3A3Q12874 501 aaKnown RBP eCLIP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 DCST2Q5T1A1 773 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ATAD3BQ5T9A4 648 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 DESI1Q6ICB0 168 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 HOXD1Q9GZZ0 328 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 RAD21L1Q9H4I0 556 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SERHL2Q9H4I8 314 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 TPT1P8Q9HAU6 139 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SDHAF3Q9NRP4 125 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 B4GALT7Q9UBV7 327 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 NDUFAF1Q9Y375 327 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 GMEB1Q9Y692 573 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF462Q96JM2 2506 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ANGPT2O15123 496 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 FADS1O60427 444 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 UTS2O95399 124 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ATP6V1C1P21283 382 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 PPIBP23284 216 aaKnown RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 MST1P26927 711 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 EVI2BP34910 448 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 RFX3P48380 749 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 MASP1P48740 699 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 RPS26P62854 115 aaKnown RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 PPIAP62937 165 aaKnown RBP12.12□□□□□ -0.47
CKAP2-202ENST00000378034 KLF10Q13118 480 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
CKAP2-202ENST00000378034 RNFT1Q5M7Z0 435 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms