RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TMED4Q7Z7H5 227 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CPOQ8IVL8 374 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 BRIX1Q8TDN6 353 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 AIFM2Q9BRQ8 373 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ELL3Q9HB65 397 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SPHK2Q9NRA0 654 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM184CQ9NVA4 438 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TAS2R16Q9NYV7 291 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 NDRG2Q9UN36 371 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 A0A1B0GVT2 93 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM129A0AVI4 362 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 GOSR2O14653 212 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF780AO75290 641 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 PRSS23O95084 383 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 UBBP0CG47 229 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 UBCP0CG48 685 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 UGT2B7P16662 529 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 GIPRP48546 466 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RAP2BP61225 183 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RPS27AP62979 156 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 UBA52P62987 128 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 FAAH2Q6GMR7 532 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ASPGQ86U10 573 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CCDC190Q86UF4 302 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 BEST3Q8N1M1 668 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 HDDC3Q8N4P3 179 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 OR52N1Q8NH53 320 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 OR14C36Q8NHC7 312 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SMPDL3BQ92485 455 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SGTBQ96EQ0 304 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 DPH7Q9BTV6 452 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RSPH9Q9H1X1 276 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ANKRD19PQ9H560 264 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM185BQ9H7F4 350 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MEPEQ9NQ76 525 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CFAP20Q9Y6A4 193 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 GLOD5A6NK44 160 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZAR1LA6NP61 321 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 KRBOX1C9JBD0 128 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 KCNJ13O60928 360 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RASGRP1O95267 797 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CCND3P30281 292 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 IGFALSP35858 605 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SLC1A3P43003 542 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ARHGDIBP52566 201 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RAB8AP61006 207 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MC1RQ01726 317 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MAP4K2Q12851 820 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ILF3Q12906 894 aaKnown RBP eCLIP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SLC5A12Q1EHB4 618 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 FLYWCH1Q4VC44 716 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 NDUFAF5Q5TEU4 345 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM205Q6UW68 189 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 KIAA1324Q6UXG2 1013 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF440Q8IYI8 595 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF615Q8N8J6 731 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CCDC120Q96HB5 630 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 FCRL1Q96LA6 429 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 C5orf34Q96MH7 638 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MYO18AQ92614 2054 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 APOC1P02654 83 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 APOC3P02656 99 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 C1SP09871 688 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 GATMP50440 423 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 NRG3P56975 720 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MLIPQ5VWP3 458 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 DTX3Q8N9I9 347 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 GIMAP1Q8WWP7 306 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 NSMAFQ92636 917 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TAPBPLQ9BX59 468 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 DPEP2Q9H4A9 486 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 PLEKHA1Q9HB21 404 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF226Q9NYT6 803 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CNIH4Q9P003 139 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TMEFF2Q9UIK5 374 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SLC7A7Q9UM01 511 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SH2B3Q9UQQ2 575 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RASD1Q9Y272 281 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ALDOBP05062 364 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 CXCR1P25024 350 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 TCEAL5Q5H9L2 206 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 IER5LQ5T953 404 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 FAM205BPQ63HN1 556 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 SLC8B1Q6J4K2 584 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 DNAJC5GQ8N7S2 189 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 THEM6Q8WUY1 208 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 RIT1Q92963 219 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 NKD1Q969G9 470 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 NEURL3Q96EH8 262 aa8.27□□□□□ -1.08
PCDH9-202ENST00000377865 DDX31Q9H8H2 851 aaKnown RBP8.27□□□□□ -1.08
PCDH9-202ENST00000377865 FEZF1A0PJY2 475 aa8.27□□□□□ -1.09
PCDH9-202ENST00000377865 GFRA2O00451 464 aa8.27□□□□□ -1.09
PCDH9-202ENST00000377865 EIF1AYO14602 144 aaKnown RBP8.27□□□□□ -1.09
PCDH9-202ENST00000377865 MTRF1O75570 445 aaKnown RBP8.27□□□□□ -1.09
PCDH9-202ENST00000377865 C1orf105O95561 183 aa8.27□□□□□ -1.09
PCDH9-202ENST00000377865 CYB5AP00167 134 aa8.27□□□□□ -1.09
PCDH9-202ENST00000377865 ADH1BP00325 375 aa8.27□□□□□ -1.09
PCDH9-202ENST00000377865 IFNA21P01568 189 aa8.27□□□□□ -1.09
PCDH9-202ENST00000377865 EIF1AXP47813 144 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms