RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ZCCHC3Q9NUD5 404 aaKnown RBP20.19■□□□□ 0.82
SRM-201ENST00000376957 NTMQ9P121 344 aa20.19■□□□□ 0.82
SRM-201ENST00000376957 ZNF407Q9C0G0 2248 aa20.19■□□□□ 0.82
SRM-201ENST00000376957 DNAJC13O75165 2243 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 ADAM10O14672 748 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 NME6O75414 186 aaPredicted RBP20.18■□□□□ 0.82
SRM-201ENST00000376957 IL33O95760 270 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 ACTL6AO96019 429 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 ALOX5P09917 674 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 CHRNB4P30926 498 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 EVI2BP34910 448 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 C21orf58P58505 322 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 PMPCAQ10713 525 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 PGS1Q32NB8 556 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 FNDC7Q5VTL7 733 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 SP5Q6BEB4 398 aaPredicted RBP20.18■□□□□ 0.82
SRM-201ENST00000376957 OR56A1Q8NGH5 318 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 JADE3Q92613 823 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 CHMP6Q96FZ7 201 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 DUSP26Q9BV47 211 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 NUF2Q9BZD4 464 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 DPY30Q9C005 99 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 PTGES2Q9H7Z7 377 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 MANSC1Q9H8J5 431 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 FAM120CQ9NX05 1096 aaKnown RBP20.18■□□□□ 0.82
SRM-201ENST00000376957 PPP4R1LQ9P1A2 415 aa20.18■□□□□ 0.82
SRM-201ENST00000376957 FAF1Q9UNN5 650 aaPredicted RBP20.18■□□□□ 0.82
SRM-201ENST00000376957 HNRNPRO43390 633 aaKnown RBP20.17■□□□□ 0.82
SRM-201ENST00000376957 LAMP1P11279 417 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 CYP4B1P13584 511 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 HPGDP15428 266 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 TP53BP2Q13625 1128 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 ZNF630Q2M218 657 aaPredicted RBP20.17■□□□□ 0.82
SRM-201ENST00000376957 EMC4Q5J8M3 183 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 CES4AQ5XG92 561 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 ENPP6Q6UWR7 440 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 HDXQ7Z353 690 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 FAM83FQ8NEG4 500 aaPredicted RBP20.17■□□□□ 0.82
SRM-201ENST00000376957 OR4K17Q8NGC6 315 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 G6PC3Q9BUM1 346 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 TBL1XR1Q9BZK7 514 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 MEAF6Q9HAF1 191 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 DKKL1Q9UK85 242 aa20.17■□□□□ 0.82
SRM-201ENST00000376957 C2orf72A6NCS6 295 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 HDAC3O15379 428 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 NKX2-2O95096 273 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 COL8A1P27658 744 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 LCN1P31025 176 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 DCTP40126 519 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 PTGDSP41222 190 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 CCT3P49368 545 aaKnown RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 CLNS1AP54105 237 aaKnown RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 WDR4P57081 412 aaKnown RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 DPY19L1Q2PZI1 675 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 NHSL2Q5HYW2 709 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 WIPI1Q5MNZ9 446 aaPredicted RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 C1orf185Q5T7R7 199 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 DESI1Q6ICB0 168 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 AAGABQ6PD74 315 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 WDR53Q7Z5U6 358 aaPredicted RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 CAMKMTQ7Z624 323 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 IFNEQ86WN2 208 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 KRTCAP2Q8N6L1 136 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 WDSUB1Q8N9V3 476 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 ABTB1Q969K4 478 aaPredicted RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 NTNG2Q96CW9 530 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 RMND5BQ96G75 393 aaPredicted RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 TTYH2Q9BSA4 534 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 SERHLQ9NQF3 203 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 PNPOQ9NVS9 261 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 SPRR3Q9UBC9 169 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 TNFRSF10DQ9UBN6 386 aa20.16■□□□□ 0.82
SRM-201ENST00000376957 MRPS18CQ9Y3D5 142 aaKnown RBP20.16■□□□□ 0.82
SRM-201ENST00000376957 SCO2O43819 266 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 SRD5A2P31213 254 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 MFSD12Q6NUT3 480 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 SPATA19Q7Z5L4 167 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 RIMKLAQ8IXN7 391 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 COX18Q8N8Q8 333 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 FAM120BQ96EK7 910 aaKnown RBP20.15■□□□□ 0.82
SRM-201ENST00000376957 STACQ99469 402 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 TIMP4Q99727 224 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 GIN1Q9NXP7 522 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 TAS2R10Q9NYW0 307 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 HRH3Q9Y5N1 445 aa20.15■□□□□ 0.82
SRM-201ENST00000376957 SNNO75324 88 aaPredicted RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 EFNA1P20827 205 aaPredicted RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 ENDOUP21128 410 aaKnown RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 KIR3DL1P43629 444 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 DIO3P55073 304 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 CRYZQ08257 329 aaKnown RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 C17orf67Q0P5P2 114 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 RCAN2Q14206 197 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 GANABQ14697 944 aaKnown RBP20.14■□□□□ 0.81
SRM-201ENST00000376957 EIPR1Q53HC9 387 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 ANXA8L1Q5VT79 327 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 VASNQ6EMK4 673 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 ULK2Q8IYT8 1036 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 PSMA8Q8TAA3 256 aa20.14■□□□□ 0.81
SRM-201ENST00000376957 SFXN5Q8TD22 340 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms