RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 NPIPB8E9PQR5 432 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 SCO2O43819 266 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 EVI2BP34910 448 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 GAS1P54826 345 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 PSG6Q00889 435 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 PRSS53Q2L4Q9 553 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 FAM71E1Q6IPT2 247 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 PLXDC2Q6UX71 529 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 GRAMD2AQ8IUY3 354 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 GCNT2Q8N0V5 402 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 C4orf33Q8N1A6 199 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 CCDC63Q8NA47 563 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 RNF138Q8WVD3 245 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 G6PC3Q9BUM1 346 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 RRAGDQ9NQL2 400 aaPredicted RBP19.07■□□□□ 0.64
VSX1-201ENST00000376707 DDX18Q9NVP1 670 aaKnown RBP19.07■□□□□ 0.64
VSX1-201ENST00000376707 MKS1Q9NXB0 559 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 CLCF1Q9UBD9 225 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 MID2Q9UJV3 735 aa19.07■□□□□ 0.64
VSX1-201ENST00000376707 ZIC3O60481 467 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 NUDT17P0C025 328 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 CD99P14209 185 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 ZNF708P17019 499 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 PRPH2P23942 346 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 DSCR4P56555 118 aaPredicted RBP19.06■□□□□ 0.64
VSX1-201ENST00000376707 CLDN18P56856 261 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 GAB1Q13480 694 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 PCLAFQ15004 111 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 ZNHIT3Q15649 155 aaPredicted RBP19.06■□□□□ 0.64
VSX1-201ENST00000376707 CYP27C1Q4G0S4 372 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 RNF165Q6ZSG1 346 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 CHMP1BQ7LBR1 199 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 RIBC1Q8N443 379 aaPredicted RBP19.06■□□□□ 0.64
VSX1-201ENST00000376707 YIPF4Q9BSR8 244 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 PIGMQ9H3S5 423 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 Q9N2J8 555 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 SDHAF3Q9NRP4 125 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 GALNT8Q9NY28 637 aa19.06■□□□□ 0.64
VSX1-201ENST00000376707 C19orf53Q9UNZ5 99 aaPredicted RBP19.06■□□□□ 0.64
VSX1-201ENST00000376707 C17orf51A8MQB3 221 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 DIO3P55073 304 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 PPP2R2AP63151 447 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 EEF1A1P68104 462 aaKnown RBP19.05■□□□□ 0.64
VSX1-201ENST00000376707 KIAA0040Q15053 153 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 BCL2A1Q16548 175 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 DECR1Q16698 335 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 EEF1A1P5Q5VTE0 462 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 NOXRED1Q6NXP6 359 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 IKBIPQ70UQ0 350 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 P4HA3Q7Z4N8 544 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 C10orf107Q8IVU9 208 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 OR2L13Q8N349 312 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 AMDHD1Q96NU7 426 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 TRMOQ9BU70 441 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 DSN1Q9H410 356 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 GLIPR2Q9H4G4 154 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 MRTO4Q9UKD2 239 aaKnown RBP19.05■□□□□ 0.64
VSX1-201ENST00000376707 ABCG2Q9UNQ0 655 aa19.05■□□□□ 0.64
VSX1-201ENST00000376707 B4DXG7 233 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 UPK1AO00322 258 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 TRIM13O60858 407 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 GOSR1O95249 250 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 CLK3P49761 638 aaKnown RBP19.04■□□□□ 0.64
VSX1-201ENST00000376707 VSNL1P62760 191 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 STX5Q13190 355 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 RAET1LQ5VY80 246 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 CLEC6AQ6EIG7 209 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 PAMR1Q6UXH9 720 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 TGIF2LYQ8IUE0 185 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 UBQLNLQ8IYU4 475 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 FADS6Q8N9I5 356 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 BANPQ8N9N5 519 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 OR2M3Q8NG83 312 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 OR2W6PQ8NHA6 318 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 ELP4Q96EB1 424 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 APOPT1Q96IL0 206 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 TMUB1Q9BVT8 246 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 GATA5Q9BWX5 397 aaPredicted RBP19.04■□□□□ 0.64
VSX1-201ENST00000376707 LGALS13Q9UHV8 139 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 PACSIN3Q9UKS6 424 aa19.04■□□□□ 0.64
VSX1-201ENST00000376707 MED12Q93074 2177 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 HCRTR2O43614 444 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 FADS1O60427 444 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 SEC22BO75396 215 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 PSMG1O95456 288 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 TGM6O95932 706 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 PEPDP12955 493 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 HK1P19367 917 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 RFX3P48380 749 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 PSMD4P55036 377 aaKnown RBP19.03■□□□□ 0.64
VSX1-201ENST00000376707 B3GALT5-AS1P59052 145 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 CAMKMTQ7Z624 323 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 TRABD2AQ86V40 505 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 MEIOBQ8N635 442 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 DACH2Q96NX9 599 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 ALPK1Q96QP1 1244 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 PTGES2Q9H7Z7 377 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 FAM120CQ9NX05 1096 aaKnown RBP19.03■□□□□ 0.64
VSX1-201ENST00000376707 FLRT3Q9NZU0 649 aa19.03■□□□□ 0.64
VSX1-201ENST00000376707 MED11Q9P086 117 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms