RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 CREB1P16220 341 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ZFAND4Q86XD8 727 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 TMEM139Q8IV31 216 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 DCUN1D4Q92564 292 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 KLHL9Q9P2J3 617 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 C5P01031 1676 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 HTRA2O43464 458 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 HBQ1P09105 142 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 PAFAH1B3Q15102 231 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 TSPEARQ8WU66 669 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF780AO75290 641 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 MTNR1AP48039 350 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SGSHP51688 502 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SUMF2Q8NBJ7 301 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 HYLS1Q96M11 299 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 KCNK13Q9HB14 408 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 MRPL15Q9P015 296 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 DNAJB11Q9UBS4 358 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ALDOAP04075 364 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 RUNX2Q13950 521 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 OR14L1PQ8NHC6 308 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF689Q96CS4 500 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF736B4DX44 427 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SPDEFO95238 335 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SERPINE2P07093 398 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 FKBP10Q96AY3 582 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 TEPSINQ96N21 525 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SFXN1Q9H9B4 322 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SCAMP2O15127 329 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 GLSO94925 669 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SNAP29O95721 258 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SYPP08247 313 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 UGT3A2Q3SY77 523 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 EEF1A1P5Q5VTE0 462 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SYT14Q8NB59 555 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 PORP16435 677 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 CD79BP40259 229 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 DAP3P51398 398 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SNTB2Q13425 540 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 RCAN2Q14206 197 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF648Q5T619 568 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ANKRD54Q6NXT1 300 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 RSC1A1Q92681 617 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 C1orf226A1L170 272 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SEC14L5O43304 696 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CRYZL1O95825 349 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 NPRL3Q12980 569 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 ARHGAP19Q14CB8 494 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CASD1Q96PB1 797 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SLA2Q9H6Q3 261 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 KNG1P01042 644 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 ANKRD13BQ86YJ7 626 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 DCNP07585 359 aaKnown RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 GAAP10253 952 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 PRPS1P60891 318 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CAMK2DQ13557 499 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 LY6G5CQ5SRR4 150 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 MRPL21Q7Z2W9 205 aaKnown RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 PLEKHO2Q8TD55 490 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 DAZAP1Q96EP5 407 aaKnown RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 RETREG1Q9H6L5 497 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 PRAMEF2O60811 474 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CLIC3O95833 236 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 GLO1Q04760 184 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 OR5L1Q8NGL2 311 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SOBPA7XYQ1 873 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 GPX6P59796 221 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 ABHD17BQ5VST6 288 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 NLGN4XQ8N0W4 816 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CLEC4DQ8WXI8 215 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 OR10A5Q9H207 317 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 OR10A2Q9H208 303 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CWH43Q9H720 699 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 PLSCR1O15162 318 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CD79AP11912 226 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 DDCP20711 480 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CX3CR1P49238 355 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
VPS13A-204ENST00000376634 OLIG2Q13516 323 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 KCTD20Q7Z5Y7 419 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SERINC5Q86VE9 423 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 RAB39BQ96DA2 213 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SERTAD4Q9NUC0 356 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 ATG4BQ9Y4P1 393 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 A0A1W2PP55 124 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SULT1C2O00338 296 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 SEC14L2O76054 403 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 PTTG1O95997 202 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 CSF1P09603 554 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 FUT2Q10981 343 aa11.85□□□□□ -0.51
VPS13A-204ENST00000376634 RPS27LQ71UM5 84 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms