RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 VASNQ6EMK4 673 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 METAP1DQ6UB28 335 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 TMEM91Q6ZNR0 172 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 PARS2Q7L3T8 475 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 BMPERQ8N8U9 685 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 OR8H1Q8NGG4 311 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 AKAP1Q92667 903 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 PHF21AQ96BD5 680 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 NTNG1Q9Y2I2 539 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 CPSF4LA6NMK7 179 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 KDM4EB2RXH2 506 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 HLA-DPB1P04440 258 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 ACP5P13686 325 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 SDHBP21912 280 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 HYAL1Q12794 435 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 LY6G5CQ5SRR4 150 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 KIAA1211LQ6NV74 962 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF767PQ75MW2 155 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 RTL10Q7L3V2 364 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 TDHQ8IZJ6 230 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 C9orf62Q8N4C0 152 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 SETD7Q8WTS6 366 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 C16orf58Q96GQ5 468 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 PRRC1Q96M27 445 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC38A2Q96QD8 506 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF649Q9BS31 505 aa13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 ISG20L2Q9H9L3 353 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 NFKBIL1Q9UBC1 381 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-202ENST00000375692 TCF20Q9UGU0 1960 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 GSAPA4D1B5 854 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 SNTNA6NMZ2 147 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 SGK494L7N484 410 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 PPP2R1BP30154 601 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 TRIM23P36406 574 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 ATP6V1E1P36543 226 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 FRKP42685 505 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 TAS2R41P59536 307 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 DLX2Q07687 328 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 LASP1Q14847 261 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 ZNF77Q15935 545 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 EOGTQ5NDL2 527 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 BCL2L15Q5TBC7 163 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 UBE3DQ7Z6J8 389 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 C17orf64Q86WR6 236 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 CCDC28AQ8IWP9 274 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 ZFPM2Q8WW38 1151 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 IRF7Q92985 503 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 SECISBP2Q96T21 854 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 MACROD1Q9BQ69 325 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 SEMA4GQ9NTN9 838 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 TAS2R7Q9NYW3 318 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 TRAV6A0A075B6T7 132 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM183AA6NL82 134 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 GSTM3P21266 225 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 ADAM15Q13444 863 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 WDR45BQ5MNZ6 344 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 PIP5KL1Q5T9C9 394 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 ANKRD54Q6NXT1 300 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 MZT2AQ6P582 158 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 C7orf57Q8NEG2 295 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 FGF13Q92913 245 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 MRPL38Q96DV4 380 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 DTD2Q96FN9 168 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 AMDHD1Q96NU7 426 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 ZFR2Q9UPR6 939 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 LIPT1Q9Y234 373 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 CSNK1G3Q9Y6M4 447 aa13.23□□□□□ -0.29
CLCNKA-202ENST00000375692 LOC105371267A0A1B0GV96 52 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 A0A1W2PS29 197 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 CACNB4O00305 520 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 SOCS6O14544 535 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 GPR1P46091 355 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 NCBP2P52298 156 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 FZD5Q13467 585 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 ESCO2Q56NI9 601 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM78AQ5JUQ0 283 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 AADACL4Q5VUY2 407 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 LCTLQ6UWM7 567 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 GET4Q7L5D6 327 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 GNPDA2Q8TDQ7 276 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 DPH7Q9BTV6 452 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 PPIL3Q9H2H8 161 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 RHBGQ9H310 441 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 DDX31Q9H8H2 851 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 ATP13A2Q9NQ11 1180 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 SIRT4Q9Y6E7 314 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 CXorf51AA0A1B0GTR3 108 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 TSPAN11A1L157 253 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 OTOL1A6NHN0 477 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 LCMT2O60294 686 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 ERAL1O75616 437 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 FGF19O95750 216 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 DDX6P26196 483 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 PKLRP30613 574 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 GPR4P46093 362 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms