RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DNTTIP1Q9H147 329 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 METTL17Q9H7H0 456 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 LATS2Q9NRM7 1088 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 SPATA6Q9NWH7 488 aaPredicted RBP11.44□□□□□ -0.58
C9orf3-203ENST00000375315 MYO15AQ9UKN7 3530 aa11.44□□□□□ -0.58
C9orf3-203ENST00000375315 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 A0A1B0GW55 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 RAB36O95755 333 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4L4P0CJ87 422 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ITPKAP23677 461 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 WNT4P56705 351 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 TCTE1Q5JU00 501 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ZER1Q7Z7L7 766 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 PAQR7Q86WK9 346 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 PDZD9Q8IXQ8 264 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 IL17RCQ8NAC3 791 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 CD200R1Q8TD46 325 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 NSUN3Q9H649 340 aaKnown RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 REV1Q9UBZ9 1251 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 NPTNQ9Y639 398 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 PRSS21Q9Y6M0 314 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 OBSL1O75147 1896 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 D6RAR5 112 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 RASGRP1O95267 797 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 CPSF4O95639 269 aaKnown RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 C1QCP02747 245 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 IFNA4P05014 189 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 AHCYP23526 432 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 PBLDP30039 288 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 GABRA5P31644 462 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 BTCP35070 178 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 PTPN5P54829 565 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 RAG2P55895 527 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ST3GAL2Q16842 350 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ALG1LQ6GMV1 187 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 TMEM91Q6ZNR0 172 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 SHFQ7M4L6 423 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ACOT12Q8WYK0 555 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 FATE1Q969F0 183 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 SENP5Q96HI0 755 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ARL5BQ96KC2 179 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 BABAM2Q9NXR7 383 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 TRPS1Q9UHF7 1281 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 MBD1Q9UIS9 605 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 ING1Q9UK53 422 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-203ENST00000375315 HS3ST2Q9Y278 367 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 SLC9A8Q9Y2E8 581 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 SLC6A5Q9Y345 797 aa11.43□□□□□ -0.58
C9orf3-203ENST00000375315 A0A0G2JPF8 293 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HNRNPCL3B7ZW38 293 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 FFAR2O15552 330 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 GATCO43716 136 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 LANCL1O43813 399 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 PRKYO43930 277 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 NFATC1O95644 943 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 H2AFB2P0C5Z0 115 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HNRNPCL4P0DMR1 293 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 TNFRSF1BP20333 461 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 SP140Q13342 867 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 TPBGQ13641 420 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 GSG1Q2KHT4 349 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ATP13A5Q4VNC0 1218 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 OR4K3Q96R72 315 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 DDOQ99489 341 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 SGCEO43556 437 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 GADD45GO95257 159 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ALDOBP05062 364 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HIST1H2AGP0C0S8 130 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 H2AFB1P0C5Y9 115 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ELK1P19419 428 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HIST1H2ADP20671 130 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 GJA4P35212 333 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 PCGF2P35227 344 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 RORAP35398 523 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 OR1E2P47887 323 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 CRYBA2P53672 197 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 SSTP61278 116 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 FABP5Q01469 135 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 RUNX3Q13761 415 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HIST2H2AA3Q6FI13 130 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ALKAL2Q6UX46 152 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 C11orf65Q8NCR3 313 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 OR1M1Q8NGA1 313 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 OR8J1Q8NGP2 316 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 MTFMTQ96DP5 389 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HIST1H2AHQ96KK5 128 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HIST1H2AJQ99878 128 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 EGFL8Q99944 293 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 TREX2Q9BQ50 279 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms