RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RNASEK-C17orf49H0YIS7 233 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 EPHA5P54756 1037 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 INTS12Q96CB8 462 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 CHRDL1Q9BU40 450 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 UNC119BA6NIH7 251 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 HMSDA8MTL9 139 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 MSTNO14793 375 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 PFKMP08237 780 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CD3GP09693 182 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF791Q3KP31 576 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 GABRG1Q8N1C3 465 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 RBMXL1Q96E39 390 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 KLHL13Q9P2N7 655 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 BOLA1Q9Y3E2 137 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 OR5K3A6NET4 321 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 DEDDO75618 318 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SERPINE2P07093 398 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CX3CR1P49238 355 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ILKQ13418 452 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 VGLL2Q8N8G2 317 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 OR9K2Q8NGE7 335 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 OR2G2Q8NGZ5 317 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CELF6Q96J87 481 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 LRIT2A6NDA9 550 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 M0R2Z0 102 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 RHOQP17081 205 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 LIPJQ5W064 366 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ALKBH2Q6NS38 261 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 RPUSD3Q6P087 351 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 C14orf80Q86SX3 495 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF547Q8IVP9 402 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SLC2A12Q8TD20 617 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 DNASE1L2Q92874 299 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ALX4Q9H161 411 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 CNTNAP4Q9C0A0 1308 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 TRPM2O94759 1503 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 LAMTOR4Q0VGL1 99 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 C1orf123Q9NWV4 160 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF219Q9P2Y4 722 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF536O15090 1300 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 KCNAB3O43448 404 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SCO2O43819 266 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 LRCH4O75427 683 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CLN5O75503 358 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 IGSF6O95976 241 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF44P15621 663 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 DVL1P1P54792 670 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 SNTB1Q13884 538 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 NPNTQ6UXI9 565 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 THOC6Q86W42 341 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 ANKRD46Q86W74 232 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF563Q8TA94 476 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 L3HYPDHQ96EM0 354 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SRPX2O60687 465 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 SLC2A1P11166 492 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 MLIPQ5VWP3 458 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 OR5P2Q8WZ92 322 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CXorf58Q96LI9 332 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CNN2Q99439 309 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 MTHFD2LQ9H903 347 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 RXFP3Q9NSD7 469 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 OPN1LWP04000 364 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ADIGQ0VDE8 80 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CPNE8Q86YQ8 564 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 HCAR2Q8TDS4 363 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 FOXN4Q96NZ1 517 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 MAGI1Q96QZ7 1491 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 GALPQ9UBC7 116 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 A6NIZ1 184 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 C2CD4BA6NLJ0 364 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 AMHP03971 560 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 HOXB9P17482 250 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 RAP1BP61224 184 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 MPEG1Q2M385 716 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 PIWIL3Q7Z3Z3 882 aaKnown RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 RAB8BQ92930 207 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 FBXW11Q9UKB1 542 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 H7BYZ3 331 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SURF4O15260 269 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 AMY2AP04746 511 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SELENOWP63302 87 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CSNK2A1P68400 391 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 WSCD1Q658N2 575 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 BRICD5Q6PL45 260 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZFAND4Q86XD8 727 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 TMEM130Q8N3G9 435 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZNF485Q8NCK3 441 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 CSNK2A3Q8NEV1 391 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 FAM3CQ92520 227 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 FCRL2Q96LA5 508 aaPredicted RBP6.29□□□□□ -1.4
UBR4-204ENST00000375254 ZDHHC4Q9NPG8 344 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 THSD1Q9NS62 852 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SLC6A14Q9UN76 642 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 ATP10BO94823 1461 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 SLC16A5O15375 505 aa6.29□□□□□ -1.4
UBR4-204ENST00000375254 NSA2O95478 260 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms