RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF223Q9UK11 482 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 APBB3O95704 486 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 RPS17P08708 135 aaKnown RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 PROZP22891 400 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 GPR143P51810 404 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 NAA11Q9BSU3 229 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 TMEM9Q9P0T7 183 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 NAALAD2Q9Y3Q0 740 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ADAMTSL3P82987 1691 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 FAM171A2A8MVW0 826 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 GJB3O75712 270 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 EVI2BP34910 448 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 PBX2P40425 430 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 TMBIM6P55061 237 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 FTMTQ8N4E7 242 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 OR4K13Q8NH42 304 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 OR5P2Q8WZ92 322 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 SGTBQ96EQ0 304 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 LRR1Q96L50 414 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 APOOQ9BUR5 198 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 BIN3Q9NQY0 253 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 KCMF1Q9P0J7 381 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 SLC16A5O15375 505 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 RASAL1O95294 804 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 S1PR4O95977 384 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 IFNA17P01571 189 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 AGTR1P30556 359 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ACTA2P62736 377 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ACTG2P63267 376 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 CDK3Q00526 305 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF33AQ06730 810 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF695Q8IW36 515 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ZUFSPQ96AP4 578 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 GPR83Q9NYM4 423 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 B4GALT7Q9UBV7 327 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF705GA8MUZ8 300 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 PROS1P07225 676 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ERVK-25P63136 954 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 NR0B2Q15466 257 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 RNASE10Q5GAN6 216 aaKnown RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 FAM78AQ5JUQ0 283 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 OR4C11Q6IEV9 310 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 CCBE1Q6UXH8 406 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 FAM83HQ6ZRV2 1179 aaPredicted RBP13.57□□□□□ -0.24
TRAF1-201ENST00000373887 PRR22Q8IZ63 422 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 ST6GALNAC5Q9BVH7 336 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 PRDM9Q9NQV7 894 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 SACM1LQ9NTJ5 587 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 FAM118AQ9NWS6 357 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 NLKQ9UBE8 527 aa13.57□□□□□ -0.24
TRAF1-201ENST00000373887 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 UBFD1O14562 309 aaKnown RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 UBE2NP61088 152 aaKnown RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 ZDHHC14Q8IZN3 488 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 EID2Q8N6I1 236 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 FKBP10Q96AY3 582 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 KLHL21Q9UJP4 597 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 AHDC1Q5TGY3 1603 aaPredicted RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 MEIS3P1A6NDR6 274 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 CLN5O75503 358 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 EPOP01588 193 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 RAB6AP20340 208 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 BDKRB2P30411 391 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 CX3CR1P49238 355 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 DOC2AQ14183 400 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 LIPJQ5W064 366 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 FAM198BQ6UWH4 519 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 RGS6P49758 472 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 EEF1A1P5Q5VTE0 462 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 PLBD1Q6P4A8 553 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 NXPE4Q6UWF7 544 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 BBS1Q8NFJ9 593 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 PHOSPHO2Q8TCD6 241 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 DAZLQ92904 295 aaKnown RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 ACTR6Q9GZN1 396 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 SCN11AQ9UI33 1791 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 EMC8O43402 210 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 NPPAP01160 153 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 MPC1LP0DKB6 136 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 CD79BP40259 229 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 OR4D1Q15615 310 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 PELOQ9BRX2 385 aaKnown RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 C2orf42Q9NWW7 574 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 A0A096LPI6 279 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 SLC34A2O95436 690 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 RNH1P13489 461 aaKnown RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 RNF4P78317 190 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 MEX3BQ6ZN04 569 aaKnown RBP13.56□□□□□ -0.24
TRAF1-201ENST00000373887 TM9SF4Q92544 642 aa13.56□□□□□ -0.24
TRAF1-201ENST00000373887 MBLAC1A4D2B0 266 aaPredicted RBP13.55□□□□□ -0.24
TRAF1-201ENST00000373887 PRICKLE3O43900 615 aaPredicted RBP13.55□□□□□ -0.24
TRAF1-201ENST00000373887 P04436 131 aa13.55□□□□□ -0.24
TRAF1-201ENST00000373887 ZXDBP98169 803 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms