RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 FOLR2P14207 255 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 APEX1P27695 318 aaKnown RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 LCN1P31025 176 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 PLK1P53350 603 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 VSX2P58304 361 aaPredicted RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 STARD6P59095 220 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 DCDP81605 110 aaKnown RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 TIAL1Q01085 375 aaKnown RBP eCLIP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 PDCD1Q15116 288 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 IRF4Q15306 451 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 CCDC157Q569K6 752 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 BCL2L15Q5TBC7 163 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 CLEC6AQ6EIG7 209 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 MRNIPQ6NTE8 343 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 WASH2PQ6VEQ5 465 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 KLBQ86Z14 1044 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 MRPL41Q8IXM3 137 aaKnown RBP8.34□□□□□ -1.08
ATG4A-203ENST00000372232 PDZD9Q8IXQ8 264 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 C7orf61Q8IZ16 206 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 OR13C4Q8NGS5 318 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 MOSPD2Q8NHP6 518 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 COQ8AQ8NI60 647 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 PHF21BQ96EK2 531 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 MGLLQ99685 303 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 OR51J1Q9H342 316 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 FN3KQ9H479 309 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 ALG9Q9H6U8 611 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 B3GAT2Q9NPZ5 323 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 VNN3Q9NY84 501 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 SLAMF8Q9P0V8 285 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 DHRS7Q9Y394 339 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 GPR45Q9Y5Y3 372 aa8.34□□□□□ -1.08
ATG4A-203ENST00000372232 ISM1B1AKI9 464 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 M0R3H8 397 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 ARNTLO00327 626 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 UBFD1O14562 309 aaKnown RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 COCHO43405 550 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 KDELR3O43731 214 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 CLDN11O75508 207 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 KLKB1P03952 638 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 STSP08842 583 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 LBPP18428 481 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 IL1RNP18510 177 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 FDXRP22570 491 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 OR1D2P34982 312 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 MECP2P51608 486 aaKnown RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 KIAA1024LP59773 190 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 UBE2IP63279 158 aaKnown RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 RPS6KA2Q15349 733 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 ATAT1Q5SQI0 421 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 RPS27LQ71UM5 84 aaKnown RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 LDLRAD3Q86YD5 345 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 NAXDQ8IW45 347 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 ARRDC1Q8N5I2 433 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 C1orf52Q8N6N3 182 aaKnown RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 OR4L1Q8NH43 312 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 OR14A16Q8NHC5 309 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 OVCA2Q8WZ82 227 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 MRPL38Q96DV4 380 aaKnown RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 SOX7Q9BT81 388 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 DUSP26Q9BV47 211 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 GSTO2Q9H4Y5 243 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 ANKRA2Q9H9E1 313 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 SH3BP4Q9P0V3 963 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 PLEKHB1Q9UF11 243 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-203ENST00000372232 PCDHGA5Q9Y5G8 931 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 PCDHGA1Q9Y5H4 931 aa8.33□□□□□ -1.08
ATG4A-203ENST00000372232 ANXA2P2A6NMY6 339 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ARHGEF33A8MVX0 844 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 GPR171O14626 319 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 GDF9O60383 454 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 IL1AP01583 271 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 OSMP13725 252 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 HMGA1P17096 107 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CR2P20023 1033 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 EPHA2P29317 976 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 MAGEA2P43356 314 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 RGRP47804 291 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SUOXP51687 545 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CTSCP53634 463 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 RAB5BP61020 215 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 TNFRSF17Q02223 184 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 GK2Q14410 553 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 EXOC3L2Q2M3D2 409 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 SPDYE7PQ495Y7 208 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CDNFQ49AH0 187 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ARHGAP15Q53QZ3 475 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 TMEM88Q6PEY1 159 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZC3H14Q6PJT7 736 aaKnown RBP8.32□□□□□ -1.08
ATG4A-203ENST00000372232 CRTC1Q6UUV9 634 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 DET1Q7L5Y6 550 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 DPPA2Q7Z7J5 298 aa8.32□□□□□ -1.08
ATG4A-203ENST00000372232 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms