RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 COX7A2P14406 83 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 NPPBP16860 134 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF182P17025 639 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 HOXB9P17482 250 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 CD40LGP29965 261 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 KRT20P35900 424 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 PIK3CBP42338 1070 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 GSTM5P46439 218 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 BCAP31P51572 246 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 RGS1Q08116 209 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 CHIT1Q13231 466 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 RAPSNQ13702 412 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 TRIM16LQ309B1 348 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 PRR30Q53SZ7 412 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 VWA2Q5GFL6 755 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 PAGE2BQ5JRK9 111 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 CPTPQ5TA50 214 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 AGAP7PQ5VUJ5 663 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 GRHL2Q6ISB3 625 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 JMJD6Q6NYC1 403 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 KIRREL2Q6UWL6 708 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 MBOAT1Q6ZNC8 495 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SHISA6Q6ZSJ9 500 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF621Q6ZSS3 439 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ADCK1Q86TW2 530 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 LURAP1LQ8IV03 231 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 PLD3Q8IV08 490 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 MSRB3Q8IXL7 192 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 Q8NA96 180 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ZBTB8BQ8NAP8 495 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 MFSD9Q8NBP5 474 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 C11orf65Q8NCR3 313 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 BPIFB6Q8NFQ5 453 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ABHD11Q8NFV4 315 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 OR11G2Q8NGC1 345 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 CHTF18Q8WVB6 975 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SLC5A11Q8WWX8 675 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 METTL21AQ8WXB1 218 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 COQ8BQ96D53 544 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 HSPBAP1Q96EW2 488 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SH3YL1Q96HL8 342 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 AGAP4Q96P64 663 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 AIF1LQ9BQI0 150 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 DUSP26Q9BV47 211 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SARGQ9BW04 601 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 MMP27Q9H306 513 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF552Q9H707 407 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 SERHLQ9NQF3 203 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 KRT84Q9NSB2 600 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 PAK1IP1Q9NWT1 392 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 AHSPQ9NZD4 102 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 C19orf25Q9UFG5 118 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 NDRG4Q9ULP0 352 aaKnown RBP9.69□□□□□ -0.86
COL5A1-202ENST00000371820 TSC22D4Q9Y3Q8 395 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 UGT2A1Q9Y4X1 527 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 ASB1Q9Y576 335 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 KCNE2Q9Y6J6 123 aa9.69□□□□□ -0.86
COL5A1-202ENST00000371820 PNMA8CA0A1B0GUJ8 204 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 A0A1W2PQ72 361 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 IDSB3KWA1 339 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PTGES3LE9PB15 166 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 FOXE1O00358 373 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 RNASET2O00584 256 aaKnown RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 P2RX6O15547 441 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 FOXS1O43638 330 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 KRT75O95678 551 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF682O95780 498 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 RNF224P0DH78 156 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ICAM2P13598 275 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 SDC1P18827 310 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PCMT1P22061 227 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ACVR2AP27037 513 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 GDF5P43026 501 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 MAGEA8P43361 318 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 SLC35A2P78381 396 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 EMX1Q04741 257 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 NPRL3Q12980 569 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ITGADQ13349 1161 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 INPP5JQ15735 1006 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 TIMM50Q3ZCQ8 353 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 SLC6A19Q695T7 634 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 TRIM40Q6P9F5 258 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 NDUFAF7Q7L592 441 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 VN1R4Q7Z5H5 301 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 P2RY8Q86VZ1 359 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PRSS58Q8IYP2 241 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ARHGEF39Q8N4T4 335 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 AMER2Q8N7J2 671 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 RBMXL3Q8N7X1 1067 aaKnown RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 AMER3Q8N944 861 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ATG16L2Q8NAA4 619 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF540Q8NDQ6 660 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 OR4K1Q8NGD4 311 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 GOT1L1Q8NHS2 421 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 FAM110BQ8TC76 370 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PYCR2Q96C36 320 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 TM4SF19Q96DZ7 209 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 THOC3Q96J01 351 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms