RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 KCTD11Q693B1 232 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ULK3Q6PHR2 472 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ZNF595Q8IYB9 648 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 C6orf106Q9H6K1 298 aaPredicted RBP13.89□□□□□ -0.19
NDC1-201ENST00000371429 RAD51DO75771 328 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 IMPA1P29218 277 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 POU3F4P49335 361 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 PRPS1P60891 318 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ACTA2P62736 377 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ACTG2P63267 376 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 TAP2Q03519 686 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ADAM15Q13444 863 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ALG10Q5BKT4 473 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 LCN8Q6JVE9 175 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 C6orf89Q6UWU4 347 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■□□ 17
NDC1-201ENST00000371429 CHIAQ9BZP6 476 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 C1GALT1Q9NS00 363 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 CBLCQ9ULV8 474 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 SLC7A7Q9UM01 511 aa13.89□□□□□ -0.19
NDC1-201ENST00000371429 ERCC1P07992 297 aaPredicted RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 POU3F2P20265 443 aaPredicted RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 CDKN2CP42773 168 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 MAT1AQ00266 395 aaKnown RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 RBPJQ06330 500 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 SEMA3BQ13214 749 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 ZNF675Q8TD23 568 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 TESCQ96BS2 214 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 NEDD4LQ96PU5 975 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 FOXQ1Q9C009 403 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 TAS2R10Q9NYW0 307 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 DHRS4L1P0CG22 281 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 ELK4P28324 431 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 ADPRHP54922 357 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 RRADP55042 308 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 ANKDD1AQ495B1 522 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 C6orf141Q5SZD1 244 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 LIPKQ5VXJ0 399 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 SLC18B1Q6NT16 456 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 UBALD2Q8IYN6 164 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 GALNT6Q8NCL4 622 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 EGLN2Q96KS0 407 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 PINK1Q9BXM7 581 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 IRF2BPLQ9H1B7 796 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 TMPRSS11EQ9UL52 423 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 PADI1Q9ULC6 663 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 C14orf166Q9Y224 244 aaKnown RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 DCAF7P61962 342 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 SELENOWP63302 87 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 VEZF1Q14119 521 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 MANEAQ5SRI9 462 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 PLBD1Q6P4A8 553 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 GALNT15Q8N3T1 639 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 ELP5Q8TE02 316 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 HOXB13Q92826 284 aaPredicted RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 DPH1Q9BZG8 443 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 A0A1W2PPK0 400 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 GKN3PP0CG01 181 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 FUT1P19526 365 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 TCN2P20062 427 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 ACVR1BP36896 505 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 NKAIN2Q5VXU1 208 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 WDR53Q7Z5U6 358 aaPredicted RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 CEACAM19Q7Z692 300 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 RNF175Q8N4F7 328 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 OR8S1Q8NH09 359 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 NEIL3Q8TAT5 605 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 LKAAEAR1Q8TD35 194 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 URM1Q9BTM9 101 aaKnown RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 SLC22A4Q9H015 551 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 POLE3Q9NRF9 147 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 DHCR7Q9UBM7 475 aaKnown RBP13.88□□□□□ -0.19
NDC1-201ENST00000371429 AASSQ9UDR5 926 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 RNF215Q9Y6U7 377 aa13.88□□□□□ -0.19
NDC1-201ENST00000371429 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 PRRT4C9JH25 899 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 CASC3O15234 703 aaKnown RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 PRKXP51817 358 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 CSNK2A1P68400 391 aaPredicted RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 ZP2Q05996 745 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 TRAM1Q15629 374 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 CCDC36Q8IYA8 594 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 BOKQ9UMX3 212 aaPredicted RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 FARSAQ9Y285 508 aaKnown RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 TLCD2A6NGC4 264 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 TNFRSF10CO14798 259 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PHYHO14832 338 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PRH1P02810 166 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 ABOP16442 354 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 ZNF829Q3KNS6 432 aaPredicted RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 TMED4Q7Z7H5 227 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 EPHX3Q9H6B9 360 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 VAPAQ9P0L0 249 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 RRP8O43159 456 aaKnown RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 HRGP04196 525 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms