RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 LOXL4Q96JB6 756 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 OR6C1Q96RD1 312 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 YTHDF1Q9BYJ9 559 aaKnown RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 POLE3Q9NRF9 147 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 MAN2C1Q9NTJ4 1040 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 NDRG4Q9ULP0 352 aaKnown RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 SRPK3Q9UPE1 567 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 POFUT2Q9Y2G5 429 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 COL5A1P20908 1838 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 NPIPA5A0A0B4J1W7 369 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 CLDN24A6NM45 220 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 C17orf105B2RV13 164 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 NPIPA7E9PJI5 369 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 FAAHO00519 579 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 NTN3O00634 580 aaPredicted RBP16.27■□□□□ 0.2
SSBP3-203ENST00000371319 SOX30O94993 753 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 TIAF1O95411 115 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 IGKV1D-16P01601 117 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 TFAP2AP05549 437 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 GUSBP08236 651 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 NPIPA8P0DM63 369 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 RYKP34925 604 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 TPD52P55327 224 aaPredicted RBP16.27■□□□□ 0.2
SSBP3-203ENST00000371319 SMIM11AP58511 58 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 CD47Q08722 323 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 LARS2Q15031 903 aaKnown RBP16.27■□□□□ 0.2
SSBP3-203ENST00000371319 VWA2Q5GFL6 755 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 FGD3Q5JSP0 725 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 DCST1Q5T197 706 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 LAIR2Q6ISS4 152 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 PRR23CQ6ZRP0 262 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 PMM1Q92871 262 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 GFM1Q96RP9 751 aaKnown RBP16.27■□□□□ 0.2
SSBP3-203ENST00000371319 OR10A5Q9H207 317 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 PNO1Q9NRX1 252 aaKnown RBP16.27■□□□□ 0.2
SSBP3-203ENST00000371319 SLC22A11Q9NSA0 550 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 SLC13A4Q9UKG4 626 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 TMCC3Q9ULS5 477 aa16.27■□□□□ 0.2
SSBP3-203ENST00000371319 A0A1W2PRQ8 180 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 TRIM64CA6NLI5 447 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 AGRPO00253 132 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 UGT2B17O75795 530 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 OXSR1O95747 527 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 GASTP01350 101 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 DBIP07108 87 aaKnown RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ZNF883P0CG24 379 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ATP6V1B1P15313 513 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 TNNI3P19429 210 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 TRHRP34981 398 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 RPS6KA3P51812 740 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 CDH15P55291 814 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 DGCR6Q14129 220 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ZNHIT3Q15649 155 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 MEP1AQ16819 746 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 MINDY4Q4G0A6 757 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 MFSD4BQ5TF39 518 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 AQP11Q8NBQ7 271 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 OR7G1Q8NGA0 311 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 OR4N2Q8NGD1 307 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 C16orf52Q8NHV5 167 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 FNDC11Q9BVV2 318 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 PRR14Q9BWN1 585 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 MKKSQ9NPJ1 570 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 KLHL28Q9NXS3 571 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ZNF232Q9UNY5 417 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 VCANP13611 3396 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 TCRBV16S1A1N1A0A5B0 115 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 SH3PXD2BA1X283 911 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 D6RAR5 112 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 PEX12O00623 359 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 KHNYNO15037 678 aaKnown RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 CLPTM1O96005 669 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 LINGO3P0C6S8 592 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 IL7RP16871 459 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 RPP38P78345 283 aaKnown RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 LIN52Q52LA3 116 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 EIPR1Q53HC9 387 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 FOXB2Q5VYV0 432 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 PODNL1Q6PEZ8 512 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 DBX2Q6ZNG2 339 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 CCDC71Q8IV32 467 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 APLFQ8IW19 511 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 TMEM151BQ8IW70 566 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ZNF321PQ8N8H1 164 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ZSCAN1Q8NBB4 408 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 SLC38A9Q8NBW4 561 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 SLC7A13Q8TCU3 470 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 NR4A3Q92570 626 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 HDAC2Q92769 488 aaKnown RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 ING2Q9H160 280 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 CACYBPQ9HB71 228 aaKnown RBP16.26■□□□□ 0.19
SSBP3-203ENST00000371319 RARRES3Q9UL19 164 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 PCDHGA5Q9Y5G8 931 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 GMPPBQ9Y5P6 360 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 HSPE1-MOB4S4R3N1 261 aa16.26■□□□□ 0.19
SSBP3-203ENST00000371319 A8MUA0 341 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 CT45A8P0DMV1 189 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 CT45A9P0DMV2 189 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 NID1P14543 1247 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 RPL5P46777 297 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms