RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TMEM120AQ9BXJ8 343 aa6.57□□□□□ -1.36
USP1-202ENST00000371146 ADGRE2Q9UHX3 823 aa6.57□□□□□ -1.36
USP1-202ENST00000371146 BAG5Q9UL15 447 aa6.57□□□□□ -1.36
USP1-202ENST00000371146 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
USP1-202ENST00000371146 C2orf92A0A1B0GVN3 265 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 A0A1W2PNU3 283 aaPredicted RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 TRBC2A0A5B9 178 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 LRIT2A6NDA9 550 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 KPNA4O00629 521 aaPredicted RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 PLPP1O14494 284 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 AIFM1O95831 613 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 UROSP10746 265 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 KIR3DL1P43629 444 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 POU3F4P49335 361 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PRKAA2P54646 552 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 NRG3P56975 720 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 NUP107P57740 925 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 FRG1Q14331 258 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 RRM2BQ7LG56 351 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 MTDHQ86UE4 582 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 SATL1Q86VE3 508 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 SLC5A8Q8N695 610 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ZNF321PQ8N8H1 164 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 OR4K17Q8NGC6 315 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 C9orf43Q8TAL5 461 aaPredicted RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 MAP6Q96JE9 813 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 UBXN10Q96LJ8 280 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 TMEM68Q96MH6 324 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 SMAD5Q99717 465 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 TNFRSF12AQ9NP84 129 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 DMRT3Q9NQL9 472 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PTBP2Q9UKA9 531 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 DNAJC15Q9Y5T4 150 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 IGKV1-8A0A0C4DH67 115 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 GABRR3A8MPY1 467 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PDPK1O15530 556 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 HCRTR2O43614 444 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PRAMEF4O60810 478 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 CCDC22O60826 627 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 BAG2O95816 211 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 RECKO95980 971 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 AGR2O95994 175 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 MT-ND1P03886 318 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 GDF1P27539 372 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 GCAP28676 217 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 HOXC12P31275 282 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 NUDT2P50583 147 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 RRADP55042 308 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PKNOX1P55347 436 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 EEF1A1P68104 462 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 HSF1Q00613 529 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 FOXK2Q01167 660 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 TLE3Q04726 772 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ILKQ13418 452 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 IL10RAQ13651 578 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ARHGAP19Q14CB8 494 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 C3AR1Q16581 482 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 EEF1A1P5Q5VTE0 462 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 C9orf135Q5VTT2 229 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PRAMEF9Q5VWM5 478 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PIP4P1Q86T03 277 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 EIF1ADQ8N9N8 165 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 MINDY2Q8NBR6 621 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 CPT1CQ8TCG5 803 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 SLC25A36Q96CQ1 311 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ZC3HAV1LQ96H79 300 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 C3orf30Q96M34 536 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ACPTQ9BZG2 426 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ZNF768Q9H5H4 540 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 NECTIN3Q9NQS3 549 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ADPRHL2Q9NX46 363 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 DIMT1Q9UNQ2 313 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 GTF3C1Q12789 2109 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 OR7A17O14581 309 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 GNGT2O14610 69 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 SERPINA6P08185 405 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 HOXC4P09017 264 aaPredicted RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 LAMP1P11279 417 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 HSD3B2P26439 372 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 RAB14P61106 215 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 HOXC5Q00444 222 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 MC2RQ01718 297 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ALDH6A1Q02252 535 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 LGALS3BPQ08380 585 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ZXDCQ2QGD7 858 aaPredicted RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 ABHD17CQ6PCB6 329 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 YRDCQ86U90 279 aaKnown RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 PAQR7Q86WK9 346 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 P3H2Q8IVL5 708 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 D2HGDHQ8N465 521 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 CNEP1R1Q8N9A8 125 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 OR52R1Q8NGF1 315 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 OR56A3Q8NH54 315 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 OR14L1PQ8NHC6 308 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 MS4A6EQ96DS6 147 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 PPP3R2Q96LZ3 170 aa6.56□□□□□ -1.36
USP1-202ENST00000371146 ZNF578Q96N58 590 aaPredicted RBP6.56□□□□□ -1.36
USP1-202ENST00000371146 NPAS2Q99743 824 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms