RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 IFNW1P05000 195 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 ZNF23P17027 643 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 ITGA2P17301 1181 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 CSRP1P21291 193 aaKnown RBP22.13■■□□□ 1.13
SNX3-203ENST00000368979 PRKAR1BP31321 381 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 NHLH1Q02575 133 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 ZNF311Q5JNZ3 666 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 DHRS4L2Q6PKH6 230 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 ASCL5Q7RTU5 278 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 VRK2Q86Y07 508 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 PACRGLQ8N7B6 248 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 OR52P1PQ8NH57 321 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 MESP1Q9BRJ9 268 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 VCXQ9H320 206 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 COPS7AQ9UBW8 275 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 IFT52Q9Y366 437 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 AK5Q9Y6K8 562 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 ENPP4Q9Y6X5 453 aa22.13■■□□□ 1.13
SNX3-203ENST00000368979 IGHV3-20A0A0C4DH32 117 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 AGAP5A6NIR3 686 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 PDLIM1O00151 329 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 LGI1O95970 557 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 IGKV1D-16P01601 117 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 PIGAP37287 484 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 PPICP45877 212 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 IST1P53990 364 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 EBPQ15125 230 aaKnown RBP22.12■■□□□ 1.13
SNX3-203ENST00000368979 ZAR1Q86SH2 424 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 CARM1Q86X55 608 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 C9orf40Q8IXQ3 194 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 PEX5LQ8IYB4 626 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 CBR4Q8N4T8 237 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 NFAM1Q8NET5 270 aaPredicted RBP22.12■■□□□ 1.13
SNX3-203ENST00000368979 ADIPOR1Q96A54 375 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 ZNF347Q96SE7 839 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 WDR77Q9BQA1 342 aaPredicted RBP22.12■■□□□ 1.13
SNX3-203ENST00000368979 TRIM45Q9H8W5 580 aaPredicted RBP22.12■■□□□ 1.13
SNX3-203ENST00000368979 C8orf4Q9NR00 106 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 C19orf25Q9UFG5 118 aaPredicted RBP22.12■■□□□ 1.13
SNX3-203ENST00000368979 CBLCQ9ULV8 474 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 PPIEQ9UNP9 301 aaKnown RBP22.12■■□□□ 1.13
SNX3-203ENST00000368979 CHST2Q9Y4C5 530 aa22.12■■□□□ 1.13
SNX3-203ENST00000368979 OR6C76A6NM76 312 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 KLF7O75840 302 aaPredicted RBP22.11■■□□□ 1.13
SNX3-203ENST00000368979 DNAJB5O75953 348 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 RASAL1O95294 804 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 THBS1P07996 1170 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 GPR68Q15743 365 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 NNATQ16517 81 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 C3orf38Q5JPI3 329 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 C6orf15Q6UXA7 325 aaPredicted RBP22.11■■□□□ 1.13
SNX3-203ENST00000368979 CPEB2Q7Z5Q1 589 aaKnown RBP22.11■■□□□ 1.13
SNX3-203ENST00000368979 TMEM179BQ7Z7N9 219 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 CACTIN-AS1Q8N1I8 211 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 SVOPLQ8N434 492 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 GALNT4Q8N4A0 578 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 OR4D11Q8NGI4 311 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 OR5K1Q8NHB7 308 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 PHOX2BQ99453 314 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 SEMA4CQ9C0C4 833 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 ZNF443Q9Y2A4 671 aaPredicted RBP22.11■■□□□ 1.13
SNX3-203ENST00000368979 WDR87Q6ZQQ6 2873 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 CENPVL1A0A0U1RR11 272 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 FRG2CA6NGY1 282 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 H0YJX3 145 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 DRD5P21918 477 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 DCTP40126 519 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 DCAF7P61962 342 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 TIPARPQ7Z3E1 657 aaKnown RBP22.11■■□□□ 1.13
SNX3-203ENST00000368979 ZNF605Q86T29 641 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 LACC1Q8IV20 430 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 B3GNT7Q8NFL0 401 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 ARHGDIGQ99819 225 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 WFDC6Q9BQY6 131 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 FOXJ2Q9P0K8 574 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 KCNE5Q9UJ90 142 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 OR10H1Q9Y4A9 318 aa22.11■■□□□ 1.13
SNX3-203ENST00000368979 TM4SF5O14894 197 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 DBIP07108 87 aaKnown RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 UMODP07911 640 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 MAPK14Q16539 360 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 NRF1Q16656 503 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 TMEM164Q5U3C3 297 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 PAPD4Q6PIY7 484 aaKnown RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 TBPL2Q6SJ96 375 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 ZNF836Q6ZNA1 936 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 ZDHHC13Q8IUH4 622 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 BCORP1Q8N888 145 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 OR2Y1Q8NGV0 311 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 LCORQ96JN0 433 aaPredicted RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 NXF5Q9H1B4 397 aaKnown RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 CACYBPQ9HB71 228 aaKnown RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 ZNF223Q9UK11 482 aaPredicted RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 PADI1Q9ULC6 663 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 SLC9A8Q9Y2E8 581 aa22.1■■□□□ 1.13
SNX3-203ENST00000368979 PTRH2Q9Y3E5 179 aaKnown RBP22.1■■□□□ 1.13
SNX3-203ENST00000368979 LOC102723996A0A087X1L8 192 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 NPIPA5A0A0B4J1W7 369 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 C2orf92A0A1B0GVN3 265 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 NPIPA7E9PJI5 369 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms