RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 LOC400499M0QZD8 3231 aa12.77□□□□□ -0.36
TPM3-211ENST00000368531 NPIPA5A0A0B4J1W7 369 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 EVPLLA8MZ36 301 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 NPIPA7E9PJI5 369 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 HMGN4O00479 90 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 HS6ST1O60243 411 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 IL33O95760 270 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 P04436 131 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 NPIPA8P0DM63 369 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 NAGAP17050 411 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 ATP6V1C1P21283 382 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
TPM3-211ENST00000368531 PRDX6P30041 224 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 NUDT2P50583 147 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 MVDP53602 400 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 PNLIPRP2P54317 469 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 DSTNP60981 165 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 RGNQ15493 299 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 GPAT3Q53EU6 434 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 COQ5Q5HYK3 327 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 SPPL2AQ8TCT8 520 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 HGDQ93099 445 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 SGCZQ96LD1 299 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 ANKRD27Q96NW4 1050 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 BBC3Q96PG8 261 aaPredicted RBP12.77□□□□□ -0.37
TPM3-211ENST00000368531 RAD21L1Q9H4I0 556 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 PIF1Q9H611 641 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 TAGLN3Q9UI15 199 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
TPM3-211ENST00000368531 A0A0G2JMM0 328 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 A0A1W2PPB8 328 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 A0A1W2PRS3 328 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 C2orf72A6NCS6 295 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 KIR3DP1A8MWS1 328 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 FXYD1O00168 92 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 ICOSLGO75144 302 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 UTS2O95399 124 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 CBX6O95503 412 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 NUDT7P0C024 238 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 NR2F1P10589 423 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 DNASE1L1P49184 302 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 PSMD4P55036 377 aaKnown RBP12.76□□□□□ -0.37
TPM3-211ENST00000368531 PMP22Q01453 160 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 KLRB1Q12918 225 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 EFR3AQ14156 821 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 GPR68Q15743 365 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 SYPL1Q16563 259 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 GRAMD1BQ3KR37 738 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 NANOGP8Q6NSW7 305 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.76□□□□□ -0.37
TPM3-211ENST00000368531 HMGN2P46Q86SG4 172 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 SULF2Q8IWU5 870 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 DND1Q8IYX4 353 aaKnown RBP12.76□□□□□ -0.37
TPM3-211ENST00000368531 C10orf111Q8N326 155 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 ANKFN1Q8N957 763 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 GOLM1Q8NBJ4 401 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 TMEM178AQ8NBL3 297 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 FAM110BQ8TC76 370 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 ROPN1LQ96C74 230 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 TMCO6Q96DC7 493 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 JSRP1Q96MG2 331 aaPredicted RBP12.76□□□□□ -0.37
TPM3-211ENST00000368531 SDF2Q99470 211 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 METTL7AQ9H8H3 244 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 NANOGQ9H9S0 305 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 DEPPQ9NTK1 212 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 KLF13Q9Y2Y9 288 aaPredicted RBP12.76□□□□□ -0.37
TPM3-211ENST00000368531 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
TPM3-211ENST00000368531 CNTRLQ7Z7A1 2325 aa12.76□□□□□ -0.37
TPM3-211ENST00000368531 PRAMEF27A3QJZ7 478 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 CDK2AP1O14519 115 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 ASNA1O43681 348 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 SCO2O43819 266 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 SLC28A2O43868 658 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 PEX1O43933 1283 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 NME2P1O60361 137 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 SOX30O94993 753 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 AGR2O95994 175 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 PRB1P04280 392 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 BCHEP06276 602 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 ESRRAP11474 423 aaPredicted RBP12.75□□□□□ -0.37
TPM3-211ENST00000368531 GPX2P18283 190 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 CNR1P21554 472 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 NME2P22392 152 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 RFC3P40938 356 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 RNF144AP50876 292 aaPredicted RBP12.75□□□□□ -0.37
TPM3-211ENST00000368531 PSPHP78330 225 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 RPP38P78345 283 aaKnown RBP12.75□□□□□ -0.37
TPM3-211ENST00000368531 MXRA7P84157 204 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 FUT5Q11128 374 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 KRT72Q14CN4 511 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 RABL3Q5HYI8 236 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 TRPM8Q7Z2W7 1104 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 CHDHQ8NE62 594 aaPredicted RBP12.75□□□□□ -0.37
TPM3-211ENST00000368531 PAQR8Q8TEZ7 354 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 MAL2Q969L2 176 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms