RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TRBC1P01850 177 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 ALDOBP05062 364 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PRKCHP24723 683 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PSMB4P28070 264 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 HADHBP55084 474 aaKnown RBP8.21□□□□□ -1.1
SYNE1-206ENST00000367253 SLC35G1Q2M3R5 365 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 SCGB2B2Q4G0G5 96 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 C6orf141Q5SZD1 244 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 FAM199XQ6PEV8 388 aaPredicted RBP8.21□□□□□ -1.1
SYNE1-206ENST00000367253 SLC44A3Q8N4M1 653 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 OR5K1Q8NHB7 308 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 TRMT2BQ96GJ1 504 aaKnown RBP8.21□□□□□ -1.1
SYNE1-206ENST00000367253 B3GNT4Q9C0J1 378 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 OCEL1Q9H607 264 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 SIAEQ9HAT2 523 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 FAM118AQ9NWS6 357 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 PLLPQ9Y342 182 aa8.21□□□□□ -1.1
SYNE1-206ENST00000367253 TRAV17A0A0B4J275 112 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF98A6NK75 572 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SOCS5O75159 536 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SLITRK5O94991 958 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CD82P27701 267 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 AGTR2P50052 363 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SLC12A3P55017 1021 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RPS15AP62244 130 aaKnown RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 GPLD1P80108 840 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 MC2RQ01718 297 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ACSBG2Q5FVE4 666 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF789Q5FWF6 425 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 GCNT6Q5T4J0 391 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 FAM183BPQ6ZVS7 135 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CSNK1A1LQ8N752 337 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 PRELID2Q8N945 189 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RCBTB1Q8NDN9 531 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ADPRHL1Q8NDY3 354 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 GPBAR1Q8TDU6 330 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 TMEM40Q8WWA1 233 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 LOXL4Q96JB6 756 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 DOHHQ9BU89 302 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 FN3KQ9H479 309 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 NUDT4Q9NZJ9 180 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 R4GN57 208 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 TCRBV9S1A1TA0A576 114 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RNASET2O00584 256 aaKnown RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 F10P00742 488 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 MMP2P08253 660 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CYC1P08574 325 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 C1SP09871 688 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SNHG28P0DPA3 235 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 MPSTP25325 297 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CERS1P27544 350 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ALDH3B2P48448 385 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CEBPDP49716 269 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CLRN1P58418 232 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RHDQ02161 417 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RAB32Q13637 225 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 DAG1Q14118 895 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF460Q14592 562 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 NFATC4Q14934 902 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF630Q2M218 657 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ABLIM2Q6H8Q1 611 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF627Q7L945 461 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 TMED4Q7Z7H5 227 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SERPINA9Q86WD7 417 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 UEVLDQ8IX04 471 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 KCT2Q8NC54 265 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ST8SIA4Q92187 359 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 PIGQQ9BRB3 760 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 HCAR1Q9BXC0 346 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 OR51B5Q9H339 312 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SPACA1Q9HBV2 294 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RPS10P5Q9NQ39 176 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 FBXO5Q9UKT4 447 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 FBXO4Q9UKT5 387 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 PCDHGA9Q9Y5G4 932 aaKnown RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 A0A1B0GW15 77 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 DAPL1A0PJW8 107 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 BLACEA4D250 179 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 PIP5K1BO14986 540 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 NME6O75414 186 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SCO1O75880 301 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 PDYNP01213 254 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 RAP2AP10114 183 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 FDXRP22570 491 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CRHR1P34998 444 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 C21orf58P58505 322 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 CLINT1Q14677 625 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ATXN7L3Q14CW9 347 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 MARCH9Q86YJ5 346 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ARFGAP1Q8N6T3 406 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 OR52J3Q8NH60 311 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF420Q8TAQ5 688 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 SLC35G5Q96KT7 338 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 TWNKQ96RR1 684 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 GMLQ99445 158 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 MRPL45Q9BRJ2 306 aaKnown RBP8.2□□□□□ -1.1
SYNE1-206ENST00000367253 PBDC1Q9BVG4 233 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 GON7Q9BXV9 100 aa8.2□□□□□ -1.1
SYNE1-206ENST00000367253 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms