RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 A4GNTQ9UNA3 340 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 ASF1AQ9Y294 204 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 YARS2Q9Y2Z4 477 aaKnown RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 SPIN1Q9Y657 262 aaPredicted RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 COL6A3P12111 3177 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 SMIM30A4D0T7 59 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 SH3BP5O60239 455 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 EGFP01133 1207 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 KIR2DL1P43626 348 aaPredicted RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 P2RY14Q15391 338 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 HNRNPA1L2Q32P51 320 aaKnown RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 C3orf38Q5JPI3 329 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 C11orf96Q7Z7L8 435 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 HMGN2P46Q86SG4 172 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 SYT14Q8NB59 555 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 OR52I1Q8NGK6 324 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 EXOSC8Q96B26 276 aaKnown RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 ARRDC3Q96B67 414 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 MSANTD3Q96H12 275 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 KCNJ15Q99712 375 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 TMEM43Q9BTV4 400 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 RERGLQ9H628 205 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 GALNT9Q9HCQ5 603 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 SEMA3GQ9NS98 782 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 GLTPQ9NZD2 209 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 P2RX2Q9UBL9 471 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 SF3B6Q9Y3B4 125 aaKnown RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 AUP1Q9Y679 476 aa13.81□□□□□ -0.2
PRKN-204ENST00000366896 TCF20Q9UGU0 1960 aaKnown RBP13.81□□□□□ -0.2
PRKN-204ENST00000366896 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 PRAMEF27A3QJZ7 478 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 RAB36O95755 333 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 C6P13671 934 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 PTBP1P26599 531 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-204ENST00000366896 PSMB5P28074 263 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 ETV5P41161 510 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 ETV1P50549 477 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-204ENST00000366896 MRPL28Q13084 256 aaKnown RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 RIN1Q13671 783 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 SF3A2Q15428 464 aaKnown RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 UAP1L1Q3KQV9 507 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 SPDYE7PQ495Y7 208 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 SDE2Q6IQ49 451 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 LAPTM4BQ86VI4 370 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 FBXL6Q8N531 539 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 AKAP1Q92667 903 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-204ENST00000366896 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 BCL2L10Q9HD36 194 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 COMMD3Q9UBI1 195 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 SEC14L3Q9UDX4 400 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 TAC3Q9UHF0 121 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 M0R3H8 397 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 CHRM5P08912 532 aaPredicted RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 TNNI3P19429 210 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 DRD1P21728 446 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 SEC13P55735 322 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 RPS25P62851 125 aaKnown RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 CDK5Q00535 292 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 REEP5Q00765 189 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 PIN1Q13526 163 aaPredicted RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 ENPP2Q13822 863 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 ANGPT1Q15389 498 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 SYPL1Q16563 259 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 KLHL22Q53GT1 634 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 ENTPD8Q5MY95 495 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 QSOX2Q6ZRP7 698 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 MRGPREQ86SM8 312 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 NUDT13Q86X67 352 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 PLA2G15Q8NCC3 412 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 OR8H1Q8NGG4 311 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 OMA1Q96E52 524 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 GPR137Q96N19 417 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 GFM1Q96RP9 751 aaKnown RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 TREX2Q9BQ50 279 aaPredicted RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 SPATA5L1Q9BVQ7 753 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 LHX9Q9NQ69 397 aa13.8□□□□□ -0.2
PRKN-204ENST00000366896 ELF5Q9UKW6 265 aaPredicted RBP13.8□□□□□ -0.2
PRKN-204ENST00000366896 EDDM13A0A1B0GTR0 161 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SGK494L7N484 410 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 PRKYO43930 277 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 TMPRSS11DO60235 418 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 PLOD3O60568 738 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 RPN2P04844 631 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 GAAP10253 952 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 GSTM3P21266 225 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 CCT3P49368 545 aaKnown RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 C1orf94Q6P1W5 598 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 OR5D16Q8NGK9 328 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 C1GALT1C1Q96EU7 318 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 FGF20Q9NP95 211 aaPredicted RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 TEX10Q9NXF1 929 aaPredicted RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 MALT1Q9UDY8 824 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 CDH10Q9Y6N8 788 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 STON1Q9Y6Q2 735 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 A0A0G2JN53 185 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms