RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 COLEC12Q5KU26 742 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 AGBL2Q5U5Z8 902 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 MTFR2Q6P444 385 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 KLC3Q6P597 504 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 LCTLQ6UWM7 567 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 MDGA2Q7Z553 956 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 CROCCP2Q86T23 111 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 TMEM200AQ86VY9 491 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 PAQR7Q86WK9 346 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 OR2Y1Q8NGV0 311 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 TCP10LQ8TDR4 215 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 ATL1Q8WXF7 558 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 IP6K3Q96PC2 410 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 OR2A5Q96R48 311 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 EGFL8Q99944 293 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SELENOSQ9BQE4 189 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 DPH7Q9BTV6 452 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 ACAT2Q9BWD1 397 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 PCBD2Q9H0N5 130 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SPNS1Q9H2V7 528 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 CENPHQ9H3R5 247 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 MRPS30Q9NP92 439 aaKnown RBP7.27□□□□□ -1.25
YBX3-204ENST00000366290 CCDC177Q9NQR7 707 aaPredicted RBP7.27□□□□□ -1.25
YBX3-204ENST00000366290 WWOXQ9NZC7 414 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 CD274Q9NZQ7 290 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SENP1Q9P0U3 644 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SLC17A7Q9P2U7 560 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 HSF4Q9ULV5 492 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 SLC22A14Q9Y267 594 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 PADI2Q9Y2J8 665 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 PCSK5Q92824 1860 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 TEX15Q9BXT5 2789 aa7.27□□□□□ -1.25
YBX3-204ENST00000366290 IGLV3-12A0A075B6K2 115 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 LINC01548A6NM66 108 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 SYCE1LA8MT33 242 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 CNOT3O75175 753 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 STK16O75716 305 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 RPS17P08708 135 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 PGM1P36871 562 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 RPS6KA3P51812 740 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 MVDP53602 400 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 MAGOHP61326 146 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 RPS18P62269 152 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 CSNK1G2P78368 415 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 TSTA3Q13630 321 aaPredicted RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 PCLAFQ15004 111 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 WASHC2DQ5SRD0 308 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 GARNL3Q5VVW2 1013 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 FAM219BQ5XKK7 198 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 FRMPD2BQ6IN97 320 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 CAPN13Q6MZZ7 669 aaPredicted RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 ZYG11AQ6WRX3 759 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 ZNF813Q6ZN06 617 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 ZNF788Q6ZQV5 615 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 RPS27LQ71UM5 84 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 LRRC70Q7Z2Q7 622 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 THOC6Q86W42 341 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 TCAIMQ8N3R3 496 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 SEMA6DQ8NFY4 1073 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 OR52N4Q8NGI2 321 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 C9orf43Q8TAL5 461 aaPredicted RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 NEIL2Q969S2 332 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 PHF21BQ96EK2 531 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 MOCOSQ96EN8 888 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 RNFT2Q96EX2 444 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 ADAD1Q96M93 576 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 TSNARE1Q96NA8 513 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 FAM111AQ96PZ2 611 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 TMEM237Q96Q45 408 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 SMC6Q96SB8 1091 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 SLC7A5P2Q9GIP4 190 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 CTDSP1Q9GZU7 261 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 CUTCQ9NTM9 273 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 TXLNGQ9NUQ3 528 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 ABCF3Q9NUQ8 709 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 TMEM184CQ9NVA4 438 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 DHCR7Q9UBM7 475 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 GRID1Q9ULK0 1009 aa7.26□□□□□ -1.25
YBX3-204ENST00000366290 USP9YO00507 2555 aaPredicted RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 USP9XQ93008 2570 aaPredicted RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 TNRC6AQ8NDV7 1962 aaKnown RBP7.26□□□□□ -1.25
YBX3-204ENST00000366290 SCN2AQ99250 2005 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 A0A0J9YVX5 310 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 A0A1W2PQ72 361 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 HYKKA2RU49 373 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 VSTM2BA6NLU5 285 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 H0YGG7 62 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 MKRN2OSH3BPM6 223 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 K7EPI3 171 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 E2F3O00716 465 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 TXNDC9O14530 226 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 PRPF4O43172 522 aaKnown RBP eCLIP7.25□□□□□ -1.25
YBX3-204ENST00000366290 UMODP07911 640 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 CDH1P12830 882 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 CYP4B1P13584 511 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 GFAPP14136 432 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 HOXB9P17482 250 aaPredicted RBP7.25□□□□□ -1.25
YBX3-204ENST00000366290 CD22P20273 847 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 BMP5P22003 454 aa7.25□□□□□ -1.25
YBX3-204ENST00000366290 ATP5F1P24539 256 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms