RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CHRNGP07510 517 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 NEFHP12036 1026 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZNF708P17019 499 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 NTSP30990 170 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ARRB2P32121 409 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EVI2BP34910 448 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 KRT20P35900 424 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PEX19P40855 299 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 STARP49675 285 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZNF155Q12901 538 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 BCL2A1Q16548 175 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 SPNS3Q6ZMD2 512 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZNF551Q7Z340 670 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 IFNEQ86WN2 208 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 HOMEZQ8IX15 550 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 AENQ8WTP8 325 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 RNASE6Q93091 150 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DDX18Q9NVP1 670 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FLRT3Q9NZU0 649 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CLCF1Q9UBD9 225 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ABCG2Q9UNQ0 655 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TMED5Q9Y3A6 229 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 OR10H1Q9Y4A9 318 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 F8P00451 2351 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZNF469Q96JG9 3925 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TTC36A6NLP5 189 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TMEM233B4DJY2 109 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 HCRTR2O43614 444 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 LINC00032P0C843 101 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DPP4P27487 766 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 KIR2DL3P43628 341 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CLDN15P56746 228 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FOXF2Q12947 444 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 MYBPHQ13203 477 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 RCAN2Q14206 197 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ARL13AQ5H913 290 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 EXOSC6Q5RKV6 272 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ANKRD26P1Q6NSI1 321 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 WDR93Q6P2C0 686 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 AAGABQ6PD74 315 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TCP10LQ8TDR4 215 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 WNT2BQ93097 391 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GFM2Q969S9 779 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CIDECQ96AQ7 238 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GIMAP5Q96F15 307 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZFP3Q96NJ6 502 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FAM111AQ96PZ2 611 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 MECRQ9BV79 373 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TMEM109Q9BVC6 243 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 REEP4Q9H6H4 257 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CRIM1Q9NZV1 1036 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TRAF6Q9Y4K3 522 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PCNX3Q9H6A9 2034 aa12.38□□□□□ -0.43
TNFRSF1A-202ENST00000366159 IGLV3-32A0A0A0MS00 114 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PDPK1O15530 556 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TYROBPO43914 113 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 NKX2-2O95096 273 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 IGKV1D-16P01601 117 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PRPS2P11908 318 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 BCKDHAP12694 445 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CREB1P16220 341 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 UQCRC1P31930 480 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 OPRM1P35372 400 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GCKP35557 465 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ETV4P43268 484 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 AGFG1P52594 562 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DAZAP2Q15038 168 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DECR1Q16698 335 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 XKR7Q5GH72 579 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 SH2D4BQ5SQS7 431 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PLXDC2Q6UX71 529 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ZZZ3Q8IYH5 903 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FAM110BQ8TC76 370 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TWIST2Q8WVJ9 160 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CAVIN3Q969G5 261 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 MTERF3Q96E29 417 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 TSSK3Q96PN8 268 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 DSN1Q9H410 356 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 Q9N2J8 555 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 RASSF1Q9NS23 344 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ACSS1Q9NUB1 689 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 FAM120CQ9NX05 1096 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 ITGB1BP2Q9UKP3 347 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 GXYLT2A0PJZ3 443 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 CLCA1A8K7I4 914 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 H0Y3Z8 333 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 PIP5K1BO14986 540 aa12.37□□□□□ -0.43
TNFRSF1A-202ENST00000366159 AKAP10O43572 662 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms