RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 RGS4P49798 205 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCR8P51685 355 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 NR0B1P51843 470 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 CDKN2DP55273 166 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 MLF1P58340 268 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 RAB8AP61006 207 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 HERC3Q15034 1050 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 HSP90AA5PQ58FG0 334 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 AWAT2Q6E213 333 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 LCTLQ6UWM7 567 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM57BQ71RH2 274 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 PCGF5Q86SE9 256 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 CTAGE6Q86UF2 777 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 MARVELD2Q8N4S9 558 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM57AQ8TBR7 257 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 ELP5Q8TE02 316 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 PHF10Q8WUB8 498 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 MAIP1Q8WWC4 291 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 MAGOHBQ96A72 148 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZBTB9Q96C00 473 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 C14orf79Q96F83 325 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 LINGO1Q96FE5 620 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 TRMT61AQ96FX7 289 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 SNF8Q96H20 258 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF845Q96IR2 970 aaPredicted RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAR2Q96K12 515 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 TSNARE1Q96NA8 513 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 SERPINB12Q96P63 405 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR4K3Q96R72 315 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR1F2PQ96R84 312 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 OLFM1Q99784 485 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 UCK2Q9BZX2 261 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 PCBD2Q9H0N5 130 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 PARVBQ9HBI1 364 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 MCCC2Q9HCC0 563 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 XAB2Q9HCS7 855 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 PAPOLBQ9NRJ5 636 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 ARL15Q9NXU5 204 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 COQ3Q9NZJ6 369 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 COMMD10Q9Y6G5 202 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 C2CD3Q4AC94 2353 aa4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 PHF3Q92576 2039 aaKnown RBP4.79□□□□□ -1.64
RNU4-4P-201ENST00000364588 INTS1Q8N201 2190 aaKnown RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 POLQO75417 2590 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 A0A0G2JN53 185 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TRBV11-1A0A0K0K1C0 115 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TRBC2A0A5B9 178 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 MAGEB16A2A368 324 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 PABPN1LA6NDY0 278 aaKnown RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM90A10PA6NDY2 464 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 SAGE2PA6NJ88 616 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 C4orf51C9J302 202 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 PSMD12O00232 456 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 EIF3FO00303 357 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 SLC16A5O15375 505 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 BANF1O75531 89 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 MYO1DO94832 1006 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 GUCA1CO95843 209 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 MLNP12872 115 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HIST1H2ADP20671 130 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 CAPN3P20807 821 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 IL10P22301 178 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 PPP2R1BP30154 601 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HLCSP50747 726 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 SKP1P63208 163 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 BTKQ06187 659 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 RGS1Q08116 209 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 RBBP5Q15291 538 aaKnown RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF260Q3ZCT1 412 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 CMPK2Q5EBM0 449 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TOR1AIP1Q5JTV8 583 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 ARMC3Q5W041 872 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 DUPD1Q68J44 220 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 UGT3A1Q6NUS8 523 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 C16orf47Q6ZP98 133 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 QSOX2Q6ZRP7 698 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 ABHD13Q7L211 337 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 MDGA2Q7Z553 956 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TMPRSS11BQ86T26 416 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCDC71Q8IV32 467 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 LMNTD2Q8IXW0 634 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 EID3Q8N140 333 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 CYP4Z2PQ8N1L4 340 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 RPRMLQ8N4K4 120 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TMEM156Q8N614 296 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 MCUQ8NE86 351 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 NFAM1Q8NET5 270 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR4K1Q8NGD4 311 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 NT5CQ8TCD5 201 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 UTP15Q8TED0 518 aaKnown RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 NRGNQ92686 78 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 NEIL2Q969S2 332 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 MS4A14Q96JA4 679 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HAUS8Q9BT25 410 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM167BQ9BTA0 163 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 H2AFJQ9BTM1 129 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 DEFB126Q9BYW3 111 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM129AQ9BZQ8 928 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms