RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 IKBIPQ70UQ0 350 aa9.92□□□□□ -0.82
SMC3-201ENST00000361804 FAM181AQ8N9Y4 354 aa9.92□□□□□ -0.82
SMC3-201ENST00000361804 BEX1Q9HBH7 125 aa9.92□□□□□ -0.82
SMC3-201ENST00000361804 ZFR2Q9UPR6 939 aaKnown RBP9.92□□□□□ -0.82
SMC3-201ENST00000361804 NPIPA5A0A0B4J1W7 369 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ABHD14A-ACY1A0A1B0GW23 586 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 NPIPA7E9PJI5 369 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 PRODHO43272 600 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 LYRM1O43325 122 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 NPIPA8P0DM63 369 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ADRB3P13945 408 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 EPCAMP16422 314 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 CEBPBP17676 345 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 SMSP52788 366 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 FAPQ12884 760 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 FZD5Q13467 585 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 C2orf27AQ580R0 203 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ZNF311Q5JNZ3 666 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 C6orf132Q5T0Z8 1188 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 C1orf94Q6P1W5 598 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 GDPGP1Q6ZNW5 385 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 AMZ2Q86W34 360 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 NUDT13Q86X67 352 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 SUN3Q8TAQ9 357 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 AIF1LQ9BQI0 150 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ARHGAP9Q9BRR9 750 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 NEUROD4Q9HD90 331 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ACOXLQ9NUZ1 547 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 COQ3Q9NZJ6 369 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 MOSPD1Q9UJG1 213 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 E9PI62 339 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 DNAJB6O75190 326 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 REM1O75628 298 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 LGI1O95970 557 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ALPPP05187 535 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMC3-201ENST00000361804 LAMTOR1Q6IAA8 161 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 TMEM91Q6ZNR0 172 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ESPNLQ6ZVH7 1005 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ADGRD2Q7Z7M1 963 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 CLDN22Q8N7P3 220 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 OR13C5Q8NGS8 318 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 DEDD2Q8WXF8 326 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 MENTQ9BUN1 341 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 SLC35C2Q9NQQ7 365 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 CXorf51AA0A1B0GTR3 108 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 IGLON5A6NGN9 336 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ZNF780AO75290 641 aaPredicted RBP9.91□□□□□ -0.82
SMC3-201ENST00000361804 CSNK1G2P78368 415 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 ID2Q02363 134 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 AGERQ15109 404 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 CEP78Q5JTW2 689 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 LCTLQ6UWM7 567 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 CPOQ8IVL8 374 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 HDHD2Q9H0R4 259 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 MBNL1Q9NR56 388 aaKnown RBP9.91□□□□□ -0.82
SMC3-201ENST00000361804 AHSPQ9NZD4 102 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 SLC9A8Q9Y2E8 581 aa9.91□□□□□ -0.82
SMC3-201ENST00000361804 PDE9AO76083 593 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 ALX3O95076 343 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 CLUP10909 449 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 PCSK2P16519 638 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 POU3F3P20264 500 aaPredicted RBP9.9□□□□□ -0.82
SMC3-201ENST00000361804 BCL6P41182 706 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 CCR8P51685 355 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 SLC16A1P53985 500 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 PRMT2P55345 433 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 MLF2Q15773 248 aaPredicted RBP9.9□□□□□ -0.82
SMC3-201ENST00000361804 C3orf38Q5JPI3 329 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 C9orf64Q5T6V5 341 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 OR4C11Q6IEV9 310 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 RFPL4BQ6ZWI9 263 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 ETFBKMTQ8IXQ9 262 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 C12orf76Q8N812 135 aaPredicted RBP9.9□□□□□ -0.82
SMC3-201ENST00000361804 GDPD1Q8N9F7 314 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 ZNF485Q8NCK3 441 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 OR7G1Q8NGA0 311 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 SPPL3Q8TCT6 385 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 C17orf50Q8WW18 174 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 SAMD8Q96LT4 415 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 FERD3LQ96RJ6 166 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
SMC3-201ENST00000361804 TMEM74BQ9NUR3 256 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 SLC23A1Q9UHI7 598 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 FBXL4Q9UKA2 621 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 LIPT1Q9Y234 373 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 C12orf71A8MTZ7 269 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 GKN3PP0CG01 181 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 PRG2P13727 222 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 LAG3P18627 525 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 KELP23276 732 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 SHC1P29353 583 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 HOXD11P31277 338 aaPredicted RBP9.9□□□□□ -0.82
SMC3-201ENST00000361804 RPS5P46782 204 aaKnown RBP9.9□□□□□ -0.82
SMC3-201ENST00000361804 PDX1P52945 283 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 ST8SIA6P61647 398 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 ABATP80404 500 aa9.9□□□□□ -0.82
SMC3-201ENST00000361804 TPBGQ13641 420 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms