RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TMED4Q7Z7H5 227 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OR2AJ1Q8NGZ0 328 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 LRRC20Q8TCA0 184 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 CREB3L4Q8TEY5 395 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 C15orf40Q8WUR7 153 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 CDS1Q92903 461 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 MMP28Q9H239 520 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 THSD1Q9NS62 852 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 PIAS3Q9Y6X2 628 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 POLR2AP24928 1970 aaKnown RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 EIF1AYO14602 144 aaKnown RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 RNF13O43567 381 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 NR4A2P43354 598 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 NTRK2Q16620 822 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SYT6Q5T7P8 510 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SLC25A25Q6KCM7 469 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 QSOX2Q6ZRP7 698 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF765Q7L2R6 523 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 LNX2Q8N448 690 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 Q8N9G6 341 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 THAP4Q8WY91 577 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 AKAP1Q92667 903 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 GAL3ST3Q96A11 431 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 C16orf58Q96GQ5 468 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 TGM7Q96PF1 710 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OR5M11Q96RB7 305 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 ALG8Q9BVK2 526 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 CACNG6Q9BXT2 260 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 DDX31Q9H8H2 851 aaKnown RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 ERVK-11Q9UQG0 969 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 CCDC85CA6NKD9 419 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 PPP1R3DO95685 299 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 AHRP35869 848 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SOX9P48436 509 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 HHEXQ03014 270 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 RAB40BQ12829 278 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 ELOAQ14241 798 aaKnown RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SCGB2B2Q4G0G5 96 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OLIG3Q7RTU3 272 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 TMEM239Q8WW34 195 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OR4K3Q96R72 315 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OR7D2Q96RA2 312 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OR6C2Q9NZP2 312 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 FXYD6-FXYD2A0A087WZ82 144 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 H3BNC9 293 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 K7ESM1 405 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 OR2B3O76000 313 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 IFNA7P01567 189 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 GJA4P35212 333 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 LIPAP38571 399 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF81P51508 661 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 MAZP56270 477 aaKnown RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SLC35A2P78381 396 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 DUSP7Q16829 419 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 PAQR7Q86WK9 346 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 MS4A8Q9BY19 250 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 PITHD1Q9GZP4 211 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 FXYD6Q9H0Q3 95 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 EVA1BQ9NVM1 165 aa15.39■□□□□ 0.05
SCAF1-201ENST00000360565 NUFIP1Q9UHK0 495 aaKnown RBP15.39■□□□□ 0.05
SCAF1-201ENST00000360565 SLC5A10A0PJK1 596 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 TOXO94900 526 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 PVRP15151 417 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 HNRNPA2B1P22626 353 aaKnown RBP15.38■□□□□ 0.05
SCAF1-201ENST00000360565 TRA2BP62995 288 aaKnown RBP15.38■□□□□ 0.05
SCAF1-201ENST00000360565 FBXO46Q6PJ61 603 aaPredicted RBP15.38■□□□□ 0.05
SCAF1-201ENST00000360565 DNM1P34Q6PK57 102 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 Q6ZNX1 250 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF227Q86WZ6 799 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 SYT14Q8NB59 555 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 RPLP0P6Q8NHW5 317 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 EGLN3Q9H6Z9 239 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 EXO5Q9H790 373 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 TM7SF3Q9NS93 570 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 MED11Q9P086 117 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 HYKKA2RU49 373 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 IL7P13232 177 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ARFRP1Q13795 201 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 XKRXQ6PP77 449 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 BTN2A1Q7KYR7 527 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 TMPRSS12Q86WS5 348 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF101Q8IZC7 436 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ARMC10Q8N2F6 343 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 OR4F15Q8NGB8 312 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ZMYND19Q96E35 227 aaPredicted RBP15.38■□□□□ 0.05
SCAF1-201ENST00000360565 SERINC2Q96SA4 455 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 OR2B2Q9GZK3 357 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 PDE7BQ9NP56 450 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 A0A1W2PQ09 198 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 NPIPA5E9PKD4 350 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 I3L521 148 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 AIFM1O95831 613 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 RAB3BP20337 219 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 FAM71E1Q6IPT2 247 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 SLC46A3Q7Z3Q1 461 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 HMGCLL1Q8TB92 370 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 SPRYD4Q8WW59 207 aaPredicted RBP15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ACOT12Q8WYK0 555 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 CHFRQ96EP1 664 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms