RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ZDHHC22Q8N966 263 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 LINGO1Q96FE5 620 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 RBM18Q96H35 190 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 BRINP2Q9C0B6 783 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 NXF5Q9H1B4 397 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 RAB6BQ9NRW1 208 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 ARL15Q9NXU5 204 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 NPAP1Q9NZP6 1156 aa5.27□□□□□ -1.57
CDC42SE2-201ENST00000360515 TRAV20A0A0B4J274 112 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 A0A1W2PR48 441 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM234BA2RU67 622 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ERICH4A6NGS2 130 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 HAUS5O94927 633 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 NDUFA7O95182 113 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CT62P0C5K7 136 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CPMP14384 443 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 HOXB1P14653 301 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CPN2P22792 545 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 PTX3P26022 381 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 BUD31P41223 144 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 UBASH3AP57075 661 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 IL13RA1P78552 427 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 SARNPP82979 210 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CHRNB3Q05901 458 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF470Q6ECI4 717 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ABLIM2Q6H8Q1 611 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 B3GLCTQ6Y288 498 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 STK32CQ86UX6 486 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CCDC50Q8IVM0 306 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF786Q8N393 782 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 NAT8LQ8N9F0 302 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM13CQ8NE31 585 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ANKK1Q8NFD2 765 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 PINK1Q9BXM7 581 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 DNAJC11Q9NVH1 559 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CISD1Q9NZ45 108 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMEFF2Q9UIK5 374 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 FBXL2Q9UKC9 423 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 PCDHA9Q9Y5H5 950 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 DSPPQ9NZW4 1301 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR5H1A6NKK0 313 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 IGFBP1P08833 259 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 DHRS4L1P0CG22 281 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 PGAM1P18669 254 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC6A8P48029 635 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CDH11P55287 796 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZKSCAN8Q15776 578 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF239Q16600 458 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC48A1Q6P1K1 146 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 FIGNL1Q6PIW4 674 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 BHLHA15Q7RTS1 189 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR14L1PQ8NHC6 308 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF75CPQ92670 426 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 LRRC39Q96DD0 335 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 UBXN10Q96LJ8 280 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 GBP4Q96PP9 640 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 LYSTQ99698 3801 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 STOML1Q9UBI4 398 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 METRNQ9UJH8 293 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 REXO2Q9Y3B8 237 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 OR2M5A3KFT3 312 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ANKDD1BA6NHY2 528 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 NPIPB8E9PQR5 432 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CYTIPO60759 359 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 LDB3O75112 727 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 IL33O95760 270 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 IFNA16P05015 189 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 RNASE1P07998 156 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 NR2F6P10588 404 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 DOC2AQ14183 400 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 SH2D4BQ5SQS7 431 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 TEDDM1Q5T9Z0 273 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 FAM205BPQ63HN1 556 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 BICRALQ6AI39 1079 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ZNF433Q8N7K0 673 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 ARIH2OSQ8N7S6 290 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 DVL3Q92997 716 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CPNE4Q96A23 557 aaPredicted RBP5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 SFXN2Q96NB2 322 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 CITED1Q99966 193 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 NTN4Q9HB63 628 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 TAS2R7Q9NYW3 318 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 SLC22A14Q9Y267 594 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 AMDHD2Q9Y303 409 aa5.26□□□□□ -1.57
CDC42SE2-201ENST00000360515 IGHV4-61A0A0C4DH41 118 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 LOC100289279A0A1B0GTE1 492 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 TCRBV7S2A1N4TA0A589 114 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 C2orf72A6NCS6 295 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CBFA2T2O43439 604 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 TBX19O60806 448 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 TRAPPC6AO75865 159 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 AQP8O94778 261 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 DPP4P27487 766 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 KLHL17Q6TDP4 642 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 CLNKQ7Z7G1 428 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 TMPRSS11BQ86T26 416 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 PEG10Q86TG7 708 aaKnown RBP5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 DENND6AQ8IWF6 608 aa5.25□□□□□ -1.57
CDC42SE2-201ENST00000360515 SAMD14Q8IZD0 417 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms