RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 DNAJA4Q8WW22 397 aaPredicted RBP17.45■□□□□ 0.38
SNX11-201ENST00000359238 KIAA1143Q96AT1 154 aaPredicted RBP17.45■□□□□ 0.38
SNX11-201ENST00000359238 PPCDCQ96CD2 204 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 CXorf40BQ96DE9 158 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 KLHDC7BQ96G42 594 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 IMPAD1Q9NX62 359 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 SEC14L4Q9UDX3 406 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 PCOLCE2Q9UKZ9 415 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 ALG5Q9Y673 324 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 COLEC10Q9Y6Z7 277 aa17.45■□□□□ 0.38
SNX11-201ENST00000359238 SH3D21A4FU49 640 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 PROM1O43490 865 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 SH3BP5O60239 455 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 WNT1P04628 370 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 DDX5P17844 614 aaKnown RBP17.44■□□□□ 0.38
SNX11-201ENST00000359238 SLC9A3P48764 834 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 DMWDQ09019 674 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 VANGL1Q8TAA9 524 aaPredicted RBP17.44■□□□□ 0.38
SNX11-201ENST00000359238 ZC3HAV1LQ96H79 300 aaKnown RBP17.44■□□□□ 0.38
SNX11-201ENST00000359238 TMEM80Q96HE8 168 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 SLC23A1Q9UHI7 598 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 BTNL2Q9UIR0 455 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 HEBP2Q9Y5Z4 205 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 FABP12A6NFH5 140 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 METTL12A8MUP2 240 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 PDGFBP01127 241 aaPredicted RBP17.44■□□□□ 0.38
SNX11-201ENST00000359238 ANXA8P13928 327 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 AQP1P29972 269 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 POU6F2P78424 691 aaPredicted RBP17.44■□□□□ 0.38
SNX11-201ENST00000359238 KCNJ10P78508 379 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 RHAGQ02094 409 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 DOC2BQ14184 412 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.44■□□□□ 0.38
SNX11-201ENST00000359238 PXDC1Q5TGL8 231 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 PLAG1Q6DJT9 500 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 SLC5A8Q8N695 610 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 WDR36Q8NI36 951 aaKnown RBP17.44■□□□□ 0.38
SNX11-201ENST00000359238 CCDC120Q96HB5 630 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 MIXL1Q9H2W2 232 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 ABCB9Q9NP78 766 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 GPR27Q9NS67 375 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 POLHQ9Y253 713 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 PADI2Q9Y2J8 665 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 ZNF451Q9Y4E5 1061 aa17.44■□□□□ 0.38
SNX11-201ENST00000359238 GLOD5A6NK44 160 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 TNFRSF11BO00300 401 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 RNASET2O00584 256 aaKnown RBP17.43■□□□□ 0.38
SNX11-201ENST00000359238 GCM2O75603 506 aaPredicted RBP17.43■□□□□ 0.38
SNX11-201ENST00000359238 ETFAP13804 333 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 ZBTB37Q5TC79 503 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 LCN1P1Q5VSP4 162 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 CAMKK1Q8N5S9 505 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 OR10G2Q8NGC3 310 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 OR10G6Q8NH81 332 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 UTP15Q8TED0 518 aaKnown RBP17.43■□□□□ 0.38
SNX11-201ENST00000359238 TRMT61AQ96FX7 289 aaKnown RBP17.43■□□□□ 0.38
SNX11-201ENST00000359238 TPD52L3Q96J77 140 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 HSPA12BQ96MM6 686 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 RAB11FIP5Q9BXF6 653 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 BHLHE41Q9C0J9 482 aaPredicted RBP17.43■□□□□ 0.38
SNX11-201ENST00000359238 APOBEC3BQ9UH17 382 aaKnown RBP17.43■□□□□ 0.38
SNX11-201ENST00000359238 CEP192Q8TEP8 1941 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 BET1O15155 118 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 LGI1O95970 557 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 BCKDHBP21953 392 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 GPC1P35052 558 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 CRYBB2P43320 205 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 CXCL12P48061 93 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 LSSP48449 732 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 MAB21L1Q13394 359 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 VEZF1Q14119 521 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 RGNQ15493 299 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 ZNF425Q6IV72 752 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 TSSK4Q6SA08 328 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 ANGPTL8Q6UXH0 198 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 KCTD20Q7Z5Y7 419 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 PARGQ86W56 976 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 KCT2Q8NC54 265 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 OR8K5Q8NH50 307 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 RACGAP1Q9H0H5 632 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 TMEM184CQ9NVA4 438 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 EVA1BQ9NVM1 165 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 SPTBP11277 2137 aa17.43■□□□□ 0.38
SNX11-201ENST00000359238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 TRBC2A0A5B9 178 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 TRIM77I1YAP6 450 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 K7ESF4 209 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 GPR37L1O60883 481 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 B4GALT2O60909 372 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 FHP07954 510 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 PVRP15151 417 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 CD27P26842 260 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 MAP2K3P46734 347 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 RAB8AP61006 207 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 IKZF1Q13422 519 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 ZIC1Q15915 447 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 SLC5A12Q1EHB4 618 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 ZNF782Q6ZMW2 699 aaPredicted RBP17.42■□□□□ 0.38
SNX11-201ENST00000359238 TAF8Q7Z7C8 310 aa17.42■□□□□ 0.38
SNX11-201ENST00000359238 TMEFF1Q8IYR6 380 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms