RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ADAM29Q9UKF5 820 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SOCS2O14508 198 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ACRV1P26436 265 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 THBS2P35442 1172 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF101Q8IZC7 436 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SIDT2Q8NBJ9 832 aaKnown RBP6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM125Q96AQ2 219 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SUV39H2Q9H5I1 410 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 EDDM13A0A1B0GTR0 161 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SCAMP1O15126 338 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 IL13RA1P78552 427 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ILKQ13418 452 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SCARB1Q8WTV0 552 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 TBC1D20Q96BZ9 403 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CMKLR1Q99788 373 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 C1GALT1Q9NS00 363 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 NLKQ9UBE8 527 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MRPS17Q9Y2R5 130 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 FOXE1O00358 373 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF41P51814 821 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 EPHA5P54756 1037 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC26A5P58743 744 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 FAM124AQ86V42 546 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SERPINA12Q8IW75 414 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MCEMP1Q8IX19 187 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 GPR26Q8NDV2 337 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 OR1J1Q8NGS3 322 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM41AQ96HV5 264 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SEMA4GQ9NTN9 838 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 LRFN1Q9P244 771 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 OR1F1O43749 312 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 DBIP07108 87 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZDHHC11BP0C7U3 371 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF26P17031 533 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 TCEA1P23193 301 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RPS3AP61247 264 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MRPL49Q13405 166 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 P2RY14Q15391 338 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF689Q96CS4 500 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ORAI3Q9BRQ5 295 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC35A3Q9Y2D2 325 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PEAK1Q9H792 1746 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ANKRD34BA5PLL1 514 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MSI1O43347 362 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 APODP05090 189 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SPP1P10451 314 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MAT2AP31153 395 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 BDKRB1P46663 353 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 NUDT6P53370 316 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 EMX1Q04741 257 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 STEAP2Q8NFT2 490 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 JTBO76095 146 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PDGFAP04085 211 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CALCBP10092 127 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 S100A11P31949 105 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 LUMP51884 338 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 AAK1Q2M2I8 961 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PUS10Q3MIT2 529 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RANBP10Q6VN20 620 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PRAP1Q96NZ9 151 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CAPN10Q9HC96 672 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PCTPQ9UKL6 214 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CYP8B1Q9UNU6 501 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 FTCDNL1E5RQL4 147 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MFGE8Q08431 387 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PUM1Q14671 1186 aaKnown RBP eCLIP6.24□□□□□ -1.414e-6■□□□□ 8.5
VPS13B-202ENST00000357162 MSMO1Q15800 293 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RGL4Q8IZJ4 473 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CNIH3Q8TBE1 160 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 DUSP19Q8WTR2 217 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC25A46Q96AG3 418 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 EIF5A2Q9GZV4 153 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 G3V2L1 256 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ERI3O43414 337 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SRPX2O60687 465 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF780AO75290 641 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MMP3P08254 477 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 AMY2BP19961 511 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC6A8P48029 635 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MTNR1BP49286 362 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CLEC12AQ5QGZ9 265 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MRPL10Q7Z7H8 261 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 FBXO15Q8NCQ5 510 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RRNAD1Q96FB5 475 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 HIPK2Q9H2X6 1198 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MUTYHQ9UIF7 546 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SNRPGP15A8MWD9 76 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 TK1P04183 234 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 IDH3GP51553 393 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SEMA3BQ13214 749 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 LRRC25Q8N386 305 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MAP6Q96JE9 813 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC17A5Q9NRA2 495 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 HSFX1Q9UBD0 423 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 KLF15Q9UIH9 416 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 PSAT1Q9Y617 370 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RIDAP52758 137 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF616Q08AN1 781 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms