RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 NFKBIEO00221 500 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PPP1R3DO95685 299 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 AQP2P41181 271 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 ELOCQ15369 112 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 HACD4Q5VWC8 232 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 KIAA1211LQ6NV74 962 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 TOR1AIP2Q8NFQ8 470 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 LMF1Q96S06 567 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 SULT4A1Q9BR01 284 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 ZNF442Q9H7R0 627 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 BIN3Q9NQY0 253 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 UBR1Q8IWV7 1749 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 A0A0A6YYH2 397 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 A6NJ64 397 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 CASC3O15234 703 aaKnown RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 SYPP08247 313 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 GALK2Q01415 458 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 GBX1Q14549 363 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 MFSD13AQ14CX5 517 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 OR4N5Q8IXE1 308 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 CBARPQ8N350 705 aaPredicted RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 ADAMTS18Q8TE60 1221 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 SNAPC3Q92966 411 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 MFFQ9GZY8 342 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 HOXD1Q9GZZ0 328 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 COQ3Q9NZJ6 369 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 CNIH4Q9P003 139 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 KCNJ13O60928 360 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 APBB3O95704 486 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 RAB3DO95716 219 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 ALDOBP05062 364 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PRKACBP22694 351 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 SLC5A2P31639 672 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 KCNJ5P48544 419 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 DHPSP49366 369 aaPredicted RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 MRPL49Q13405 166 aaKnown RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 GPR19Q15760 415 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 DLK2Q6UY11 383 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 GPR149Q86SP6 731 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 IL17CQ9P0M4 197 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 KIAA0355O15063 1070 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 PRPS1P60891 318 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 SIM1P81133 766 aaPredicted RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 GPR157Q5UAW9 335 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 COMTD1Q86VU5 262 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 Q8N9G6 341 aaPredicted RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 PITX2Q99697 317 aa14.06□□□□□ -0.16
CHD4-201ENST00000357008 YARS2Q9Y2Z4 477 aaKnown RBP14.06□□□□□ -0.16
CHD4-201ENST00000357008 H3BUI4 141 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 C6P13671 934 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 GCAP28676 217 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 APCDD1Q8J025 514 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 PARP16Q8N5Y8 322 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 ZNF417Q8TAU3 575 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 DPH1Q9BZG8 443 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 ARHGAP39Q9C0H5 1083 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 C2orf42Q9NWW7 574 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 ZNF175Q9Y473 711 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 MYH6P13533 1939 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 A0A1W2PP55 124 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 SSTR4P31391 388 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 MAP4K2Q12851 820 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 SPCS2Q15005 226 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 CARD17Q5XLA6 110 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 DPY19L2P1Q6NXN4 242 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 B3GNT8Q7Z7M8 397 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 METTL2AQ96IZ6 378 aaKnown RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 KLHL15Q96M94 604 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 ZNF436Q9C0F3 470 aaPredicted RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 FN3KQ9H479 309 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 PDE7BQ9NP56 450 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 KLF15Q9UIH9 416 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 AK6Q9Y3D8 172 aaKnown RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 LOC105369274A0A096LPK9 316 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 A0A1W2PQ09 198 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 IFNA17P01571 189 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 TFAP2AP05549 437 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 AWAT2Q6E213 333 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 OR4N4Q8N0Y3 316 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 SPRYD4Q8WW59 207 aaPredicted RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 VRK1Q99986 396 aaPredicted RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 NTMT1Q9BV86 223 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 LDAHQ9H6V9 325 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 PDLIM7Q9NR12 457 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 SYNGR4O95473 234 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 MAOAP21397 527 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 POU3F4P49335 361 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 TAS2R31P59538 309 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 INAVAQ3KP66 663 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 MS4A4EQ96PG1 132 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 OR1A2Q9Y585 309 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 ARPC1BO15143 372 aaKnown RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 RHOP08100 348 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 HOXA11P31270 313 aaPredicted RBP14.05□□□□□ -0.16
CHD4-201ENST00000357008 TNFSF8P32971 234 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 CREB3L4Q8TEY5 395 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 DCUN1D4Q92564 292 aa14.05□□□□□ -0.16
CHD4-201ENST00000357008 DNAJA3Q96EY1 480 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms