RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FADS6Q8N9I5 356 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 HOXB13Q92826 284 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 TMCO6Q96DC7 493 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 NPAS1Q99742 590 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 C20orf27Q9GZN8 174 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 STMN4Q9H169 189 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 REEP4Q9H6H4 257 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 RUBCNLQ9H714 662 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 MCCC2Q9HCC0 563 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 DDX18Q9NVP1 670 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 FBXO34Q9NWN3 711 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 MID2Q9UJV3 735 aa15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 RPH3AQ9Y2J0 694 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-201ENST00000355572 MBD3L4A6NDZ8 208 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 MBD3L3A6NE82 208 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 MBD3L5A6NJ08 208 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 H0YC42 278 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 RGS14O43566 566 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 TBX19O60806 448 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 COQ9O75208 318 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 SKAP2O75563 359 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 CBR3O75828 277 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 BPGMP07738 259 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 BMP5P22003 454 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 EVI2BP34910 448 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 TPD52P55327 224 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 CLDN18P56856 261 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 IFFO1Q0D2I5 559 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 MPP2Q14168 576 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 EXOSC6Q5RKV6 272 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 EMBQ6PCB8 327 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 ADGRE4PQ86SQ3 457 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 MARCH3Q86UD3 253 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 CLYBLQ8N0X4 340 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 CNPY4Q8N129 248 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 OR2M3Q8NG83 312 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 OR7A2PQ8NGA2 310 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 OR5M1Q8NGP8 315 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 OR14L1PQ8NHC6 308 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 MBD3L2Q8NHZ7 208 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 TRMOQ9BU70 441 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 C1orf50Q9BV19 199 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 TMEM109Q9BVC6 243 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 ROPN1BQ9BZX4 212 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 DSN1Q9H410 356 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 ROPN1Q9HAT0 212 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 MED11Q9P086 117 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 CBLCQ9ULV8 474 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 OR10H1Q9Y4A9 318 aa15.17■□□□□ 0.02
PDLIM7-201ENST00000355572 CD8B2A6NJW9 211 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 ABCB7O75027 752 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 PEX11AO75192 247 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 SRD5A2P31213 254 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 TIMP3P35625 211 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 RFX3P48380 749 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 STX5Q13190 355 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 EFR3AQ14156 821 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 PTGR1Q14914 329 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 SLC25A35Q3KQZ1 300 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 LACC1Q8IV20 430 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 MREGQ8N565 214 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 PPCDCQ96CD2 204 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 C16orf58Q96GQ5 468 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 ZNF764Q96H86 408 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 METTL2AQ96IZ6 378 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 TAS2R10Q9NYW0 307 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 SH3BP4Q9P0V3 963 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 ITGB1BP2Q9UKP3 347 aa15.16■□□□□ 0.02
PDLIM7-201ENST00000355572 WDR91A4D1P6 747 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 ENO4A6NNW6 628 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 HSPB2A8KAH6 182 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 SHISA8B8ZZ34 492 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 IL33O95760 270 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 ACTL6AO96019 429 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 NEFHP12036 1026 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 CPN1P15169 458 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 GABRA3P34903 492 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 HSPB2Q16082 182 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 GRAMD1BQ3KR37 738 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 CYP27C1Q4G0S4 372 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 C6orf136Q5SQH8 315 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 IFNEQ86WN2 208 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 KRTCAP2Q8N6L1 136 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 SLC16A11Q8NCK7 471 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 NUP43Q8NFH3 380 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 RMND5BQ96G75 393 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 YIPF4Q9BSR8 244 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 NTMQ9P121 344 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 CLCF1Q9UBD9 225 aa15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 WBP11Q9Y2W2 641 aaKnown RBP15.15■□□□□ 0.02
PDLIM7-201ENST00000355572 HRNRQ86YZ3 2850 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 CLCA1A8K7I4 914 aa15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 GMFGO60234 142 aa15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 NKX2-2O95096 273 aa15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 UTS2O95399 124 aa15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 TGM6O95932 706 aa15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 LAMP1P11279 417 aa15.14■□□□□ 0.01
PDLIM7-201ENST00000355572 ZNF708P17019 499 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms