RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 UPRTQ96BW1 309 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 MS4A6EQ96DS6 147 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 RSPRY1Q96DX4 576 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 JAM3Q9BX67 310 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 ASB6Q9NWX5 421 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 SLC13A4Q9UKG4 626 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 ENTPD4Q9Y227 616 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 OR6C70A6NIJ9 312 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 SGK494L7N484 410 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 CELP19835 753 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 AVPR1BP47901 424 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 ZNF234Q14588 700 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 MLF2Q15773 248 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-202ENST00000352393 PGGHGQ32M88 737 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 PIP5KL1Q5T9C9 394 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 TRILQ7L0X0 811 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 RTL10Q7L3V2 364 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 RAB42Q8N4Z0 105 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 SMG7Q92540 1137 aaKnown RBP22.97■■□□□ 1.27
CPNE1-202ENST00000352393 ZG16BQ96DA0 208 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 GON7Q9BXV9 100 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 PRDM7Q9NQW5 492 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 IL20Q9NYY1 176 aa22.97■■□□□ 1.27
CPNE1-202ENST00000352393 AGRPO00253 132 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 EMC8O43402 210 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ERI3O43414 337 aaKnown RBP22.96■■□□□ 1.27
CPNE1-202ENST00000352393 CCNYL3P0C7X3 344 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 HTR1FP30939 366 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 PRR5P85299 388 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 FAPQ12884 760 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 FZD5Q13467 585 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 INSL4Q14641 139 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 DECR1Q16698 335 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 MZT2AQ6P582 158 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ABHD17CQ6PCB6 329 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 SFTPA1Q8IWL2 248 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ACOT4Q8N9L9 421 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 BBS1Q8NFJ9 593 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 SPRYD4Q8WW59 207 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ACOT11Q8WXI4 607 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-202ENST00000352393 MACROD1Q9BQ69 325 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 XKR8Q9H6D3 395 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 CES1P1Q9UKY3 287 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 CLTBP09497 229 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 C8orf89P0DMQ9 161 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ACRP10323 421 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 GZMKP49863 264 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ARFIP1P53367 373 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 SF3A2Q15428 464 aaKnown RBP22.96■■□□□ 1.27
CPNE1-202ENST00000352393 GAB4Q2WGN9 574 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ZNF697Q5TEC3 545 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 C1orf53Q5VUE5 145 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 ZNF620Q6ZNG0 422 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 NKAIN4Q8IVV8 208 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 JPH3Q8WXH2 748 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-202ENST00000352393 FERD3LQ96RJ6 166 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 HDAC8Q9BY41 377 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 NIPAL2Q9H841 368 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 RPRD1BQ9NQG5 326 aaKnown RBP22.96■■□□□ 1.27
CPNE1-202ENST00000352393 NLKQ9UBE8 527 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 CLCA3PQ9Y6N3 262 aa22.96■■□□□ 1.27
CPNE1-202ENST00000352393 F3P13726 295 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 HOXB3P14651 431 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-202ENST00000352393 ATP5A1P25705 553 aaKnown RBP22.95■■□□□ 1.26
CPNE1-202ENST00000352393 RAB28P51157 221 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 C6orf132Q5T0Z8 1188 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 SLC48A1Q6P1K1 146 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 RRM2BQ7LG56 351 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 C12orf66Q96MD2 445 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 INSM2Q96T92 566 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-202ENST00000352393 MARVELD1Q9BSK0 173 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 CBLCQ9ULV8 474 aa22.95■■□□□ 1.26
CPNE1-202ENST00000352393 FAM240BA0A1B0GVZ2 78 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 ZIC2O95409 532 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-202ENST00000352393 THY1P04216 161 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 CSNK2A2P19784 350 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-202ENST00000352393 GALP22466 123 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 PRKAR1BP31321 381 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 MC3RP41968 323 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 GPR4P46093 362 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 WSCD2Q2TBF2 565 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 C18orf63Q68DL7 685 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 ZNF322Q6U7Q0 402 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-202ENST00000352393 TMEM91Q6ZNR0 172 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 C17orf50Q8WW18 174 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 TRIM63Q969Q1 353 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 TRAF4Q9BUZ4 470 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-202ENST00000352393 TRMT61BQ9BVS5 477 aaKnown RBP22.94■■□□□ 1.26
CPNE1-202ENST00000352393 TEX12Q9BXU0 123 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 RNF208Q9H0X6 261 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 SLC6A20Q9NP91 592 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 EQTNQ9NQ60 294 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 CALML5Q9NZT1 146 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 ADAM30Q9UKF2 790 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 ACSL5Q9ULC5 683 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 NTNG1Q9Y2I2 539 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 SNRNP200O75643 2136 aaKnown RBP22.94■■□□□ 1.26
CPNE1-202ENST00000352393 CD8B2A6NJW9 211 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 SLC19A2O60779 497 aa22.94■■□□□ 1.26
CPNE1-202ENST00000352393 SLC43A1O75387 559 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms