RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SH3BGRLO75368 114 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 IGLV3-25P01717 112 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 TRBC1P01850 177 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4L2P0CJ85 424 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4L3P0CJ86 424 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4L4P0CJ87 422 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4L5P0CJ88 424 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4L6P0CJ89 424 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4L7P0CJ90 424 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 GPR143P51810 404 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 UBE2IP63279 158 aaKnown RBP12.46□□□□□ -0.41
IFT88-202ENST00000351808 DCAF4L1Q3SXM0 396 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 EOGTQ5NDL2 527 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 STX12Q86Y82 276 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 SPAG16Q8N0X2 631 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 UMODL1-AS1Q8N2C9 162 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 SCAMP5Q8TAC9 235 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 CIPCQ9C0C6 399 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 BARX1Q9HBU1 254 aaPredicted RBP12.46□□□□□ -0.41
IFT88-202ENST00000351808 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 AKAP7Q9P0M2 348 aaPredicted RBP12.46□□□□□ -0.41
IFT88-202ENST00000351808 DUX4Q9UBX2 424 aa12.46□□□□□ -0.41
IFT88-202ENST00000351808 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 MTMR11A4FU01 709 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 SLC9B1P1A6NJY1 282 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 ICOSLGO75144 302 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 OR2A4O95047 310 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 FBP1P09467 338 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 PNPLA4P41247 253 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 SLC1A3P43003 542 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 MTNR1AP48039 350 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 STARP49675 285 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 RAB40BQ12829 278 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 ZNF155Q12901 538 aaPredicted RBP12.46□□□□□ -0.42
IFT88-202ENST00000351808 EIF4EBP2Q13542 120 aaPredicted RBP12.46□□□□□ -0.42
IFT88-202ENST00000351808 KLF9Q13886 244 aaPredicted RBP12.46□□□□□ -0.42
IFT88-202ENST00000351808 DCST1Q5T197 706 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 ZCCHC12Q6PEW1 402 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 ALKAL1Q6UXT8 129 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 SERINC5Q86VE9 423 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 DMRTC2Q8IXT2 367 aaPredicted RBP12.46□□□□□ -0.42
IFT88-202ENST00000351808 LNX2Q8N448 690 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 KAT2AQ92830 837 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 OR2A7Q96R45 310 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 C7orf50Q9BRJ6 194 aaKnown RBP12.46□□□□□ -0.42
IFT88-202ENST00000351808 IFT27Q9BW83 186 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 FAIM2Q9BWQ8 316 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 RNF39Q9H2S5 420 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 CORO2BQ9UQ03 480 aa12.46□□□□□ -0.42
IFT88-202ENST00000351808 LCMT2O60294 686 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 PSMB1P20618 241 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 P2RY4P51582 365 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 PGDP52209 483 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 MAT1AQ00266 395 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 BOP1Q14137 746 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 ZNF235Q14590 738 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 MINDY4Q4G0A6 757 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 C18orf63Q68DL7 685 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 SLC30A6Q6NXT4 461 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ZC3H14Q6PJT7 736 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 KLBQ86Z14 1044 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ADGRG2Q8IZP9 1017 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 FBXO15Q8NCQ5 510 aaPredicted RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 PFDN5Q99471 154 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 MAP3K3Q99759 626 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 EXOSC1Q9Y3B2 195 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 TTC3P53804 2025 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 HMSDA8MTL9 139 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 PRAF2O60831 178 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ADCYAP1P18509 176 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ANXA7P20073 488 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 ACHEP22303 614 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 PPIBP23284 216 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 MMP15P51511 669 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 CDK6Q00534 326 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 HABP2Q14520 560 aaPredicted RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 SMCO1Q147U7 214 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 PGBD2Q6P3X8 592 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 SFXN4Q6P4A7 337 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 IZUMO1Q8IYV9 350 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 TOP6BLQ8N6T0 577 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 FAM71CQ8NEG0 241 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 CSGALNACT1Q8TDX6 532 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 SPRYD4Q8WW59 207 aaPredicted RBP12.45□□□□□ -0.42
IFT88-202ENST00000351808 NR4A3Q92570 626 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ART5Q96L15 291 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 MNTQ99583 582 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ZFP57Q9NU63 452 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 ADAMTS5Q9UNA0 930 aa12.45□□□□□ -0.42
IFT88-202ENST00000351808 MYO10Q9HD67 2058 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms