RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CDADC1Q9BWV3 514 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 CACNG6Q9BXT2 260 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 TMEM38AQ9H6F2 299 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 DOCK5Q9H7D0 1870 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 KDM4BO94953 1096 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 SLC25A25Q6KCM7 469 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 SCN4AP35499 1836 aa13.91□□□□□ -0.18
NUP50-201ENST00000347635 TEX13CA0A0J9YWL9 993 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 PRAMEF26H0Y7S4 382 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CRYZL1O95825 349 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 RAB3BP20337 219 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ID2Q02363 134 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 TAP2Q03519 686 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 OR51A7Q8NH64 312 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CACNG2Q9Y698 323 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 SHROOM3Q8TF72 1996 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 HTR1AP08908 422 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ILKQ13418 452 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CCSAPQ6IQ19 270 aaPredicted RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 PYHIN1Q6K0P9 492 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ZNF765Q7L2R6 523 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ZNF627Q7L945 461 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CLDN22Q8N7P3 220 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CHST4Q8NCG5 386 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 SAMD8Q96LT4 415 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ALG8Q9BVK2 526 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 EXO5Q9H790 373 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 MAU2Q9Y6X3 613 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 RGPD3A6NKT7 1758 aaPredicted RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 RGPD4Q7Z3J3 1758 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 POU6F2P78424 691 aaPredicted RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 GAB1Q13480 694 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 OR10H5Q8NGA6 315 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CHTF18Q8WVB6 975 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 GAL3ST1Q99999 423 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 LOC102723532A0A0G2JNH3 316 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 TOXO94900 526 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 KLK3P07288 261 aaPredicted RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 SYPP08247 313 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 TIMP2P16035 220 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ZNF24P17028 368 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CTGFP29279 349 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 GJA4P35212 333 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 SLC19A1P41440 591 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ACTA2P62736 377 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ACTG2P63267 376 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 OR2G6Q5TZ20 316 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 ZCCHC12Q6PEW1 402 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 SLCO4C1Q6ZQN7 724 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 BTLAQ7Z6A9 289 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 CPOQ8IVL8 374 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 KLHDC8AQ8IYD2 350 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 MS4A15Q8N5U1 240 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 SLC38A5Q8WUX1 472 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 SNAPC3Q92966 411 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
NUP50-201ENST00000347635 MTG2Q9H4K7 406 aa13.9□□□□□ -0.18
NUP50-201ENST00000347635 KANTRA0A1W2PQU2 76 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 FAM221BA6H8Z2 402 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RFPL3O75679 317 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 MAGEA2P43356 314 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RNF144AP50876 292 aaPredicted RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 ADAM8P78325 824 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 MLIPQ5VWP3 458 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 FAHD1Q6P587 224 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RASGEF1AQ8N9B8 481 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 PKMYT1Q99640 499 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 THAP7Q9BT49 309 aaPredicted RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 ACTRT3Q9BYD9 372 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RLIMQ9NVW2 624 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 HRASLS2Q9NWW9 162 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 APOBEC3BQ9UH17 382 aaKnown RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 TMEFF2Q9UIK5 374 aaPredicted RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 SIPA1L1O43166 1804 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 MAP3K8P41279 467 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 GRIN2CQ14957 1233 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 PLK5Q496M5 336 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 OR6C4Q8NGE1 309 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 OR56A3Q8NH54 315 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RHNO1Q9BSD3 238 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 SNX11Q9Y5W9 270 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 FAM227AF5H4B4 570 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RP2O75695 350 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 GABRA5P31644 462 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 DDOSTP39656 456 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 GIPRP48546 466 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 RPS25P62851 125 aaKnown RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 ASPGQ86U10 573 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 OR5W2Q8NH69 310 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 GPR34Q9UPC5 381 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 NUBP2Q9Y5Y2 271 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 CSNK1G3Q9Y6M4 447 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 SOX30O94993 753 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms